PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS1224402 to PF12225 (DUF5981)

VIMSS1224402 has 561 amino acids

Query:       DUF5981  [M=95]
Accession:   PF12225.12
Description: Methylene-tetrahydrofolate reductase C terminal
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-33  100.4   4.0    3.2e-33   99.6   4.0    1.3  1  VIMSS1224402  


Domain annotation for each sequence (and alignments):
>> VIMSS1224402  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.6   4.0   3.2e-33   3.2e-33       5      94 ..     430     521 ..     427     522 .. 0.95

  Alignments for each domain:
  == domain 1  score: 99.6 bits;  conditional E-value: 3.2e-33
       DUF5981   5 ntlflgveeevkvleekCkaCgeCvlaetggiCpvtrCpksllnGpCgGskngkCevkp.ekeCawvliyerlkklgrlekl.ekivppkdw 94 
                   ++  +g e+ +kv++++Ck+Cg+C++ e++++Cp+++Cpk+++nG+CgGs +g+Cev+p +k+C++v++y+rlkk++++ +l ++++pp++w
  VIMSS1224402 430 DNRKHGLEHLAKVITNDCKDCGDCAMFELAYLCPMSQCPKNQRNGACGGSYQGWCEVYPnQKQCIYVRAYARLKKYDEEGDLdSHHIPPANW 521
                   778899****************************************************98899*******************8999999999 PP



Or compare VIMSS1224402 to CDD or PaperBLAST