VIMSS188834 has 871 amino acids
Query: Cmr2_N [M=111]
Accession: PF12469.12
Description: CRISPR-associated protein Cmr2, N-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9e-37 111.9 0.2 6.2e-36 109.2 0.0 2.4 2 VIMSS188834
Domain annotation for each sequence (and alignments):
>> VIMSS188834
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 109.2 0.0 6.2e-36 6.2e-36 1 108 [. 221 328 .. 221 331 .. 0.91
2 ? -1.0 0.0 0.11 0.11 24 42 .. 755 773 .. 754 780 .. 0.88
Alignments for each domain:
== domain 1 score: 109.2 bits; conditional E-value: 6.2e-36
Cmr2_N 1 lvvvsigpVqefIaaaRktrDlWagSwllSylawkaieelveeyGpdvliyPslrgnplvdawle.eklseelktallpnkfvlilpkekeaeelaee 97
l+ ++i pVq fIa++Rk+ DlWa+S+llS+l++ka+e++v+++Gp+++iyPslr++p++ ++++ e++ +e+ +a+lpnk+++i+ keae+++ee
VIMSS188834 221 LLRIKIVPVQPFIANSRKQLDLWASSHLLSMLMYKALEVIVDKFGPEHVIYPSLRDQPFFLKFYLgENIGDEILVANLPNKALAIVS-GKEAEKIEEE 317
6899******************************************************997765527999*****************.5569999999 PP
Cmr2_N 98 iekalkeawke 108
i+k++++ + +
VIMSS188834 318 IKKRIRDFLLQ 328
99999987766 PP
== domain 2 score: -1.0 bits; conditional E-value: 0.11
Cmr2_N 24 agSwllSylawkaieelve 42
gS+ +S + w++i+++ +
VIMSS188834 755 SGSYYISLVGWELIRVFYN 773
69************99865 PP
Or compare VIMSS188834 to CDD or PaperBLAST