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Align XP_006538287.1 to PF12478 (UBAP2-Lig)

XP_006538287.1 has 1132 amino acids

Query:       UBAP2-Lig  [M=33]
Accession:   PF12478.12
Description: UBAP2/protein lingerer
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.2e-21   61.1   5.2    3.1e-20   58.3   0.8    2.8  2  XP_006538287.1  


Domain annotation for each sequence (and alignments):
>> XP_006538287.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.8   3.1e-20   3.1e-20       1      33 []     512     544 ..     512     544 .. 0.99
   2 !    3.9   0.3    0.0033    0.0033       6      21 ..     766     782 ..     763     784 .. 0.89

  Alignments for each domain:
  == domain 1  score: 58.3 bits;  conditional E-value: 3.1e-20
       UBAP2-Lig   1 PpSkIPasAVEMPgdanissLDVQFGaldFGse 33 
                     P+Sk+P sAVEMPg++++ +L+VQFGal+FGse
  XP_006538287.1 512 PASKVPVSAVEMPGSSDVTGLNVQFGALEFGSE 544
                     9*******************************8 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.0033
       UBAP2-Lig   6 PasAVEMPgda.nissL 21 
                     P+s V++Pg+   +ssL
  XP_006538287.1 766 PSSGVVLPGSMsTVSSL 782
                     9*********9888887 PP



Or compare XP_006538287.1 to CDD or PaperBLAST