Q5VWN6 has 2430 amino acids
Query: GARIL_Rab2_bd [M=71]
Accession: PF12480.12
Description: Golgi associated RAB2 interactor protein-like, Rab2B-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-32 98.4 0.4 1.5e-28 85.1 0.0 3.0 3 Q5VWN6
Domain annotation for each sequence (and alignments):
>> Q5VWN6
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 85.1 0.0 1.5e-28 1.5e-28 1 70 [. 94 166 .. 94 167 .. 0.98
2 ? -3.2 0.1 0.58 0.58 37 58 .. 780 801 .. 778 805 .. 0.78
3 ! 10.5 0.0 2.9e-05 2.9e-05 1 68 [. 1055 1100 .. 1055 1103 .. 0.92
Alignments for each domain:
== domain 1 score: 85.1 bits; conditional E-value: 1.5e-28
GARIL_Rab2_bd 1 tleltrllPlkfvklsvydkekqllklklvtgRsfyleLtksadepeslf...qmwlrlvhlLrsplsttekd 70
++el++ ++++++kl++++k+kql+++k++++R+f+++Lt+sa+ +e++f qm+l+++hl+rsplst+ kd
Q5VWN6 94 EVELSNRQGENIDKLTECIKNKQLAIIKCLEDRGFFILLTSSALLSEPDFggkQMGLHGLHLFRSPLSTGVKD 166
69*********************************************************************98 PP
== domain 2 score: -3.2 bits; conditional E-value: 0.58
GARIL_Rab2_bd 37 leLtksadepeslfqmwlrlvh 58
+ L ++e++ l +mw+ l +
Q5VWN6 780 TDLPDNVEEVKLLLHMWVALFY 801
66667788889999***99865 PP
== domain 3 score: 10.5 bits; conditional E-value: 2.9e-05
GARIL_Rab2_bd 1 tleltrllPlkfvklsvydkekqllklklvtgRsfyleLtksadepeslfqmwlrlvhlLrsplstte 68
t+e+++ +P++++ ++++d+ + +f eL+k+++++ sl r+p+st e
Q5VWN6 1055 TFEKNAHVPIQTEGVNTADERT-----------TFKKELIKQVSPAASL-----------RHPVSTSE 1100
79********************...........***********99996...........89998876 PP
Or compare Q5VWN6 to CDD or PaperBLAST