NP_611792.1 has 1204 amino acids
Query: DUF3730 [M=227]
Accession: PF12530.12
Description: Focadhesin/RST1, DUF3730
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-58 184.6 0.1 3.4e-58 183.0 0.1 1.9 1 NP_611792.1
Domain annotation for each sequence (and alignments):
>> NP_611792.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 183.0 0.1 3.4e-58 3.4e-58 1 226 [. 475 693 .. 475 694 .. 0.95
Alignments for each domain:
== domain 1 score: 183.0 bits; conditional E-value: 3.4e-58
DUF3730 1 LllLlyklekesnpelvlkllkaLpsLashkvcvPlvlqfvqaLssrkasellqavalrLlaklwkkedrvypfLqkllafskssesafarslievll 98
L+++++kl++e+npel+l+ll++L+s+a++k++vP++l+++++Ls+++ +++++L+ +lw++e+r+ypfL k +a + ++ ++++e +
NP_611792.1 475 LMTYIFKLAHENNPELQLELLRGLASFAVCKDNVPMILNTIRNLSTEN-----GTFCVDLYVRLWRVERRTYPFLLKQIA----QPLPDNDKRWELQI 563
7899*****************************************997.....***************************....9************* PP
DUF3730 99 slAasirdickerPdqhgedLvdalsavLvecesesp.evqalglealeeLceaevvdlssawkviqkklsldkrPevlksllsLlallaqleveheq 195
++ +++r+ic+e+P+ hg +L+ +ls++L+++++e +++l+l+a+ +Lc+ + v+++s+w++++ k++++ rP+ lksl++L+ l++ l++++ +
NP_611792.1 564 ARNHAMREICQEKPTLHGTELLPHLSNTLNHSSDEAGdLATSLALDAIYSLCDSHTVNIASTWQALGSKFRNEMRPQTLKSLYRLFGLVPMLKTPTLE 661
************************************99************************************************************ PP
DUF3730 196 yeelklevllllW.klessqddarvasaafea 226
ye+l++++l+ lW +++ +da + ++a++a
NP_611792.1 662 YEKLADDALEHLWqAISRPGTDAAQVRNALVA 693
*************4455555656666666655 PP
Or compare NP_611792.1 to CDD or PaperBLAST