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Align VIMSS10095269 to PF12530 (DUF3730)

VIMSS10095269 has 1841 amino acids

Query:       DUF3730  [M=227]
Accession:   PF12530.12
Description: Focadhesin/RST1, DUF3730
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.2e-122  393.7  15.6    3.5e-72  228.7   3.1    3.9  6  VIMSS10095269  


Domain annotation for each sequence (and alignments):
>> VIMSS10095269  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.5      0.46      0.46     122     157 ..      47      79 ..      46      80 .. 0.70
   2 !  180.7   4.7   1.6e-57   1.6e-57       1     225 [.      82     353 ..      82     356 .. 0.97
   3 ?   -3.7   0.0      0.39      0.39      51      71 ..     408     428 ..     399     447 .. 0.78
   4 !  228.7   3.1   3.5e-72   3.5e-72      10     227 .]     532     750 ..     523     750 .. 0.94
   5 ?   -3.0   0.1      0.25      0.25     127     180 ..     875     933 ..     870     941 .. 0.59
   6 ?   -1.8   0.1      0.11      0.11      13      62 ..    1506    1561 ..    1495    1593 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 0.46
        DUF3730 122 alsavLvecesespevqalglealeeLceaevvdls 157
                    a+s +L   +ses +v   +++ l  L +  v+dls
  VIMSS10095269  47 AISFCL---TSESITVVDQSVHELCRLVSDSVLDLS 79 
                    677788...777777777666666666666799987 PP

  == domain 2  score: 180.7 bits;  conditional E-value: 1.6e-57
        DUF3730   1 LllLlyklekesnpelvlkllkaLpsLashk.........vcvPlvlqfvqaLssrk..asellqavalrLlaklwkkedrvypfLqkllaf.... 81 
                    Ll+L+++le++ +++lv++++k+L++L++++         ++++++++fv++ ssr+  ++ell++v+l+++++ + ++++v++fL+++l+f    
  VIMSS10095269  82 LLELQSALEGC-DSKLVSLFVKGLGFLIRIGyernngnwkFNSTENHPFVRIQSSRVetQTELLHQVSLFVMHNRRLGMVGVCEFLEPFLNFtilr 176
                    799********.************************************************************************************ PP

        DUF3730  82 ...skssesafarslievllslAas...........irdickerPdqhged....LvdalsavL...vecesespevqalglealeeLcea..... 151
                       s+ss+s+far+li++++sl++s           +++++k+ P ++ e     Lvda+++v+   v++  e++ev++lg+++++ ++       
  VIMSS10095269 177 iplSDSSSSLFARELISSMASLCCSsrhealpifrlLMRCLKYIPGNNLEVivkiLVDAYTVVVrdlVGTGLEVTEVHLLGVQLVDGVLFLcasph 272
                    ***********************************************9999***********************************88777778** PP

        DUF3730 152 ......e.vvdlssawkviqkklsldkrPevlksllsLlallaqleveheqyeelklevllllWklessqddarvasaafe 225
                          e v++ ++++ ++qk+l+l ++++++ ++lsL+++la+++veheq++ lk  ++ll+Wk+es++ + ++a+  ++
  VIMSS10095269 273 vqtteqEsVIESLKHLLAVQKDLGLAYSHDLSLVVLSLVFMLAKSTVEHEQLCILKFLLFLLKWKTESENLSVKDAAGSSV 353
                    ******67**************************************************************98877766554 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 0.39
        DUF3730  51 ellqavalrLlaklwkkedrv 71 
                    +++ +v  r +++lw ++d +
  VIMSS10095269 408 SRVGSVVFRFMQQLWHQNDYT 428
                    567889999999999998854 PP

  == domain 4  score: 228.7 bits;  conditional E-value: 3.5e-72
        DUF3730  10 kes....npelvlkllkaLpsLashkvcvPlvlqfvqaLssrkasellqavalrLlaklwkkedrvypfLqkllafskssesafarslievllslA 101
                     ++    +++l++kll +LpsLa+++v++Plv+q++ ++++++a+ ll+a+a+rLl+++w ++dr++++Lq++l    ++ +++  s++++++s+A
  VIMSS10095269 532 LSRtnvpCQSLLSKLLGLLPSLAAQQVMIPLVVQTITPMLRKDAKGLLYATAIRLLCQTWVVNDRAFSSLQEVLR---PQGFIEYISERHICISMA 624
                    333345599******************************************************************...****************** PP

        DUF3730 102 asirdickerPdqhgedLvdalsavLvecesespevqalglealeeLceaevvdlssawkviqkklsldk.rPevlksllsLlallaqleveheqy 196
                    asi+d+ck++Pd+ g+dL+++++a++   es+++ v+alg+++l++Lcea+v+d+++aw+vi+k+ ++ k +P+++ s+++Ll+++a   +++e+y
  VIMSS10095269 625 ASIHDVCKRHPDR-GVDLILSVQACI---ESQNCPVRALGFQSLSHLCEADVIDFYTAWDVIKKHAQHIKlDPLLAYSVCHLLKWGA---MDAEAY 713
                    *************.************...**********************************************************...****** PP

        DUF3730 197 eelklevllllWklessqdda......rvasaafeaL 227
                    +e +++vl++lW+++ss++++      +++++a++aL
  VIMSS10095269 714 PEDAENVLNILWEIGSSMQKPhdsqwtKARVSAIVAL 750
                    *******************888888888888888876 PP

  == domain 5  score: -3.0 bits;  conditional E-value: 0.25
        DUF3730 127 Lvecesesp.evqalglealeeLcea....evvdlssawkviqkklsldkrPevlksll 180
                    + +++ + + + ++++l++l++ ++      ++++  + k ++ + +++    ++ksl+
  VIMSS10095269 875 VKSLQLSRNiSLALISLQSLKAFMRRwmraNILSIDATTKELSSDKTSKATNNIMKSLV 933
                    44445555557788888888888777555456666555555555555555555555555 PP

  == domain 6  score: -1.8 bits;  conditional E-value: 0.11
        DUF3730   13 npelvlkllkaLpsLashk......vcvPlvlqfvqaLssrkasellqavalrLla 62  
                     +++l+++ll +L+ L +++      +++ +v  fv +Lss+++ +  q+ +lr+ +
  VIMSS10095269 1506 EESLQSCLLCHLGGLMRIFsgsrmnKLFDDVSCFVVSLSSDQTYSCDQKSSLRVSC 1561
                     45678888888888888877777777777777777777777666666666666655 PP



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