VIMSS10253636 has 299 amino acids
Query: DUF3829 [M=284]
Accession: PF12889.11
Description: Protein of unknown function (DUF3829)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-20 60.2 19.5 1.4e-19 56.9 18.5 2.5 2 VIMSS10253636
Domain annotation for each sequence (and alignments):
>> VIMSS10253636
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 1.9 0.1 0.0076 0.0076 252 284 .] 35 67 .. 29 67 .. 0.79
2 ! 56.9 18.5 1.4e-19 1.4e-19 11 200 .. 52 237 .. 49 292 .. 0.88
Alignments for each domain:
== domain 1 score: 1.9 bits; conditional E-value: 0.0076
DUF3829 252 dsdkeklnssdmvegtpedllraynelideyns 284
+ ++++++ ++++e+++ +l ++y +++++yn+
VIMSS10253636 35 GTEQSRKEIAQRSEQDQVQLFNQYVKAVSRYNR 67
4455555578889999999*************7 PP
== domain 2 score: 56.9 bits; conditional E-value: 1.4e-19
DUF3829 11 vklyNaltgriqeslarYfswvgdeekgptgkektiyglytv..ydisecieklkkaaalkpaipelDkaakkliealkeLapllseadaYyeqkd 104
v+l+N++++ + ++r + +++ +++ ++ k + l+ + ++ ++ +++l++a + ++e + +kl+++l+e+ p+ +e+daYy++k+
VIMSS10253636 52 VQLFNQYVKA-VSRYNRMAVMFDYANTPTLNELKAGQHLTVFnaPNFKQLQKELEEAKQAGIPYDEMKEPLDKLLSKLNEITPVAEELDAYYKSKG 146
5667766655.445788888888888888888888888888899999************************************************* PP
DUF3829 105 YkdDdfakgkeLhkkllaalkayaeaakafskaleklsderekeelekikkdekmikYytlkfmieakelidelsrdkitaknlldlakfkkkldd 200
Y +D++ak ++L +k+++ ++++ +++++f++ + k++ +r +++l+++ + +k+ + ++ + ++ ++++++++ k+ ld+++++++l+
VIMSS10253636 147 YTTDNYAKEQQLGPKYVQLYEQFVPIYADFDNVMHKINTDRLQQRLQQLRDAGKKNAAAAQEVHLRLTAVLEKIDSEKQ-----LDVNAINQELQA 237
*****************************************************99999999999999999999999997.....788888887765 PP
Or compare VIMSS10253636 to CDD or PaperBLAST