YP_005098414.1 has 365 amino acids
Query: DUF4043 [M=379]
Accession: PF13252.10
Description: Protein of unknown function (DUF4043)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-109 352.5 1.0 1.6e-109 352.3 1.0 1.0 1 YP_005098414.1
Domain annotation for each sequence (and alignments):
>> YP_005098414.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 352.3 1.0 1.6e-109 1.6e-109 2 378 .. 6 361 .. 5 362 .. 0.98
Alignments for each domain:
== domain 1 score: 352.3 bits; conditional E-value: 1.6e-109
DUF4043 2 tgvnsplavkkwssklfaealkrstierrlaggtsakmpiqritdlqkgaGdevtfdLlnklngapitgdevaeGrgealsfssdklridqarka 96
++ ++p+a kkws +lf+e++k+s+++r gts++++iqr+tdl+++aGd ++fdL +l+g+p gd+ + G++eal+f +d++ idq+rk
YP_005098414.1 6 IPFGDPKAQKKWSGQLFVETTKKSYFDRFE--GTSENSVIQRKTDLESDAGDRISFDLSVQLRGKPTAGDDRLKGKEEALKFFTDEVIIDQLRKS 98
6889**********************5555..9************************************************************** PP
DUF4043 97 vdagntmdqqrtpfdlreearaaladwldrlrdqsalvhlaGargfnsnwtlasapkfaatvvnavkAptsnrilvaggaastsgslastDlltl 191
v+ag++m+++rt++dlr+ a+++l+d+++++ d++ +v+++G rg n+ + + ++a+ + n+++ p++++ l++g+a+s++ sl+++D+++
YP_005098414.1 99 VSAGGKMTRKRTAHDLRKVAKDRLSDYWAQYIDELKFVYMSGLRGTNEDFI--EDFDYAGHAGNPLRQPDAQHLLFGGAANSKA-SLTADDKMSR 190
*************************************************66..7899***************************.8********* PP
DUF4043 192 dlvdklrkladtmakparpvklegdkvaqgselyVlllhpeqysdlrtdtdtgawrdlqkaAaaralvdknPlFqgelGlyngvvlikaprvirf 286
+++ + ++a m ++ +++++g+++yV+l++p+q +dlr++ + w+++qkaAaa+ ++++nP+F+g+lG+ n+ vl++++ vir
YP_005098414.1 191 VTIERATTKARMMRARDPKTANLLPVSVGGEKHYVVLMSPYQEYDLRNEVGERGWLEVQKAAAAA-EGKNNPIFKGGLGMINNAVLHSHESVIRM 284
**************99999999**************************************99888.***************************** PP
DUF4043 287 vnadsgkiaadtgasvaveralllGaQAlaiAfgkknggtpfrwseellDhgnrlevlaeailGlkKtrFnvddGdakstDfGviavdtaak 378
+++++ g++v+++ral+lG+QA++iA+g++ gg++f w+ee+ D+gn+ v a++ilG++KtrFn DfG+ ++dtaak
YP_005098414.1 285 NDYGA-------GQNVQAARALFLGRQAAVIAYGTA-GGLRFTWKEETDDFGNEPTVAAGTILGISKTRFNKR-------DFGILTIDTAAK 361
*****.......8*********************85.89********************************99.......**********98 PP
Or compare YP_005098414.1 to CDD or PaperBLAST