CharProtDB::CH_024204 has 535 amino acids
Query: DUF4049 [M=333]
Accession: PF13258.10
Description: Domain of unknown function (DUF4049)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.4e-202 655.7 5.9 6.4e-202 655.7 5.9 1.4 2 CharProtDB::CH_024204
Domain annotation for each sequence (and alignments):
>> CharProtDB::CH_024204
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -4.2 0.1 0.37 0.37 247 263 .. 91 104 .. 71 110 .. 0.68
2 ! 655.7 5.9 6.4e-202 6.4e-202 1 333 [] 209 532 .. 209 532 .. 1.00
Alignments for each domain:
== domain 1 score: -4.2 bits; conditional E-value: 0.37
DUF4049 247 slkstpvyaryfdvstd 263
++ y+r+ d++td
CharProtDB::CH_024204 91 DIQE---YNRFADNTTD 104
4444...8888888888 PP
== domain 2 score: 655.7 bits; conditional E-value: 6.4e-202
DUF4049 1 tsartayfGdtdGrvGavlyallvsGhlGirekGesllsellkieeevlsvlkrknfneqlntnvnkvlydllnrrdiileelqqylv 88
++a+tayfGdtdGrvGavlyallvsGh+GirekG+sll+ellk+ee+++s++k+kn nkvlydlln+rd+il+el+q+++
CharProtDB::CH_024204 209 QNANTAYFGDTDGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEEMASSAYKHKN---------NKVLYDLLNTRDMILNELHQHVF 287
79******************************************************.........*********************** PP
DUF4049 89 lkddavtpciflGdqtGdrfstifGdkyildllkrirsmegnkdsrinknvvvlaGnheinfnGnytarlarmklldedtyslikdld 176
lkdda+tpciflGd+tGdrfstifGdkyil+ll+++r+megnkdsrinknvvvlaGnheinfnGnytarla++kl+++dty+lik+ld
CharProtDB::CH_024204 288 LKDDAITPCIFLGDHTGDRFSTIFGDKYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFNGNYTARLANHKLSAGDTYNLIKTLD 375
**************************************************************************************** PP
DUF4049 177 vcfydskrkvlashhGiirdeekkryilGaltvsidemknaldpvelaaiinkkhkeiiddkkfkliraislkstpvyaryfdvstdy 264
vc+yds+r+vl+shhGiirdeekk+y+lGal+v++++mkn++dp+ela+i+nkkhke++dd++f+lir+++lk+tpvya+yfd++td+
CharProtDB::CH_024204 376 VCNYDSERQVLTSHHGIIRDEEKKCYCLGALQVPFNQMKNPTDPEELANIFNKKHKEHMDDPLFHLIRSNTLKPTPVYANYFDNTTDF 463
**************************************************************************************** PP
DUF4049 265 rpkleallicsetlkgedpskyirqkvahnGnGvderiqedntvlGlnslkeardkknkiiyssglscf 333
rp++e+++ic+etlkgedpskyirqk++h+G+Gvd+++q+dn+++Glnslkeardk+nkiiyssglscf
CharProtDB::CH_024204 464 RPARERIFICGETLKGEDPSKYIRQKYGHHGPGVDHNQQFDNGIMGLNSLKEARDKNNKIIYSSGLSCF 532
********************************************************************8 PP
Or compare CharProtDB::CH_024204 to CDD or PaperBLAST