PaperBLAST – Find papers about a protein or its homologs

 

Align D2S332 to PF13349 (DUF4097)

D2S332 has 276 amino acids

Query:       DUF4097  [M=246]
Accession:   PF13349.10
Description: Putative adhesin
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-19   56.9  11.1    2.3e-19   55.8   5.4    2.6  2  D2S332    


Domain annotation for each sequence (and alignments):
>> D2S332  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   5.3   2.1e-05   2.1e-05     139     188 ..     130     176 ..      31     182 .. 0.62
   2 !   55.8   5.4   2.3e-19   2.3e-19     102     245 ..     131     272 ..     116     273 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 2.1e-05
  DUF4097 139 klettsGdvelnsvsgkkldlkstsGdlkvsntkiagslkitatsGdiel 188
              +++t  G +++++v g+ l++ ++ Gd++++   ++g++++t++ G iel
   D2S332 130 DVDTRTGEIDVSDVRGD-LTAVTETGDVRIE--AVDGTVSATTDAGTIEL 176
              45555666666666666.6666666666666..56666666666666665 PP

  == domain 2  score: 55.8 bits;  conditional E-value: 2.3e-19
  DUF4097 102 lksssGdislknvsaenlkvkstsGdvsidgseakklklettsGdvelnsvsgkkldlkstsGdlkvsntkiagslkitatsGdielslpdsasagvdasst 203
              +++  G i +++v+ + l+  ++ Gdv+i+ ++ + +  +t+ G +el +      +l+++sGd++++   i+ + +i+++sGd+el+lpd  ++++d++++
   D2S332 131 VDTRTGEIDVSDVRGD-LTAVTETGDVRIEAVDGTVS-ATTDAGTIELVDPASI-EHLETDSGDVTATLPDIERDATIETSSGDVELRLPDRLDLTLDITTD 229
              4678899******986.66678899*******98765.5999*****9885544.4********************************************** PP

  DUF4097 204 sGdvsipe.kfdeeekeekriygtegsgkkkvdvstssGDitv 245
              sG++s++      +   ++ i+++ g+g+++++v+t+ G++tv
   D2S332 230 SGNISVSGvADLPKMAGDSLIEAVVGQGTHRLEVRTETGTVTV 272
              ********87778889999***********************9 PP



Or compare D2S332 to CDD or PaperBLAST