VIMSS144617 has 309 amino acids
Query: DUF4097 [M=246]
Accession: PF13349.10
Description: Putative adhesin
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-16 47.0 28.8 1.5e-11 30.2 10.1 3.2 3 VIMSS144617
Domain annotation for each sequence (and alignments):
>> VIMSS144617
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 30.2 10.1 1.5e-11 1.5e-11 113 210 .. 22 113 .. 4 114 .. 0.84
2 ! 26.9 8.4 1.6e-10 1.6e-10 120 187 .. 102 165 .. 100 182 .. 0.86
3 ! 2.0 0.1 0.0065 0.0065 40 80 .. 231 270 .. 190 300 .. 0.72
Alignments for each domain:
== domain 1 score: 30.2 bits; conditional E-value: 1.5e-11
DUF4097 113 nvsaenlkvkstsGdvsidgseakklklettsGdvelnsvsgkkldlkstsGdlkvsntkiagslkitatsGdielslpdsasagvdasstsGdvsip 210
++ ++ v s s d++i++ + k +++ t sGd+++n+ s ++++s sGd++v+n ++ +it+ sGd+++ + ++g ++++ sG++++
VIMSS144617 22 SIQKYTGAVSSISDDLRINNEKCK-SDIGTISGDIKINRHSAVYGNVNSVSGDITVKNSIVD--KDITTVSGDVNAVNS---TIGKNIKTVSGSIEVE 113
566667889999999999998886.7999999999999999999999999999999977666..688999999999877...8999999999999875 PP
== domain 2 score: 26.9 bits; conditional E-value: 1.6e-10
DUF4097 120 kvkstsGdvsidgseakklklettsGdvelnsvsgkkldlkstsGdlkvsntkiagslkitatsGdie 187
++k+ sG +++++s+ + lettsG ++++++++ +++ +tsG +++++ +i+gs++++a s ++
VIMSS144617 102 NIKTVSGSIEVEQSTV-SGNLETTSGGIDIDTTKIN-GNVHTTSGSISMNDSTIDGSVTCKAGS--VT 165
6999*********976.689****************.********************9999866..44 PP
== domain 3 score: 2.0 bits; conditional E-value: 0.0065
DUF4097 40 nggtLtitgkekngtsvgislssfekseiivylPkdy.ledl 80
++g++ +++++ +t ++s++ +e+++ ++k+ ++d+
VIMSS144617 231 TNGKVFVNEQRVGHTAS--QSTSKKVEEVTINIAKNAsVNDI 270
34444444444444432..27777777888888877766666 PP
Or compare VIMSS144617 to CDD or PaperBLAST