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Align VIMSS619882 to PF13349 (DUF4097)

VIMSS619882 has 309 amino acids

Query:       DUF4097  [M=246]
Accession:   PF13349.10
Description: Putative adhesin
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.8e-15   40.7  30.0    4.5e-10   25.4  10.0    3.4  3  VIMSS619882  


Domain annotation for each sequence (and alignments):
>> VIMSS619882  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2  12.3   4.3e-09   4.3e-09     112     210 ..      21     113 ..       3     116 .. 0.75
   2 !   25.4  10.0   4.5e-10   4.5e-10     120     187 ..     102     165 ..      95     182 .. 0.65
   3 !    2.7   0.1    0.0038    0.0038      40      80 ..     231     270 ..     193     300 .. 0.69

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 4.3e-09
      DUF4097 112 knvsaenlkvkstsGdvsidgseakklklettsGdvelnsvsgkkldlkstsGdlkvsntkiagslkitatsGdielslpdsasagvdasstsGdvsi 209
                    ++  ++ v s s d++i++   k + + t sGd+++n+ s   ++++s sGd++v++  ++    it+ sGd+++  +   ++g ++++ sG++++
  VIMSS619882  21 NSIQKYTGAVSSISDDLRINNENCK-SNIGTISGDIKINRHSEVYGNVNSISGDITVKKSIVD--KNITTVSGDVNAVNS---TIGKNIKTVSGSIEV 112
                  4566667788888889999887765.5789999999999888888999999999999855444..567889999988766...888899999998887 PP

      DUF4097 210 p 210
                   
  VIMSS619882 113 E 113
                  6 PP

  == domain 2  score: 25.4 bits;  conditional E-value: 4.5e-10
      DUF4097 120 kvkstsGdvsidgseakklklettsGdvelnsvsgkkldlkstsGdlkvsntkiagslkitatsGdie 187
                  ++k+ sG +++++s+  +  lettsG+++++++++  +++ +tsG +++++ +i+gs++++a s  ++
  VIMSS619882 102 NIKTVSGSIEVEQSTV-SGNLETTSGRIDIDTTKIN-GNVHTTSGSISLNDSTIDGSVTCKAGS--VT 165
                  5677777777777655.4667777777777777777.777777777777777777777776644..33 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.0038
      DUF4097  40 nggtLtitgkekngtsvgislssfekseiivylPkdy.ledl 80 
                  ++g++ +++++  +t   + ++s++ +e+++ ++k+  ++d+
  VIMSS619882 231 TNGKVFVNEQRGGHTA--SQSTSKKVEEVTINIAKNAsVNDI 270
                  3444444433333333..236666667777777776666655 PP



Or compare VIMSS619882 to CDD or PaperBLAST