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Align VIMSS12381 to PF13355 (ARC6-like_IMS)

VIMSS12381 has 714 amino acids

Query:       ARC6-like_IMS  [M=117]
Accession:   PF13355.10
Description: ARC6-like, IMS domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-34  103.1   3.4      1e-33  102.6   1.2    2.1  2  VIMSS12381  


Domain annotation for each sequence (and alignments):
>> VIMSS12381  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0     0.088     0.088      41      82 ..     143     185 ..     131     192 .. 0.66
   2 !  102.6   1.2     1e-33     1e-33       3     116 ..     591     704 ..     589     705 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.088
  ARC6-like_IMS  41 aaqlkkngsyweyklksl.svesvevsskgpdratveatveEs 82 
                     +  +++ + ++y++    s + +   ++++d  ++ea+++ +
     VIMSS12381 143 WELSRERWQQQQYEFAATaSLKALARLQQDNDFPALEAEIRQE 185
                    3344444445555554444999999999999999999999865 PP

  == domain 2  score: 102.6 bits;  conditional E-value: 1e-33
  ARC6-like_IMS   3 eliqkWlsaKaealgpehdiesleeiltgpllsqwrkraaqlkkngsyweyklkslsvesvevsskgpdratveatveEsaqlyengqlkenrsy. 97 
                     ++q Wl++K+ a+g+++d+  l+++l+ +ll+q r ra+++++++ y +y++ +l++   +v++++p+ratv+a+veE +q ++ g+++++ s  
     VIMSS12381 591 MVVQGWLDSKKLAFGQNYDVGALQSVLAPNLLAQQRGRAQRDQAQKVYHQYEH-KLQILAYQVNPQDPNRATVTARVEEISQPFTLGNQQQKGSAt 685
                    79***************************************************.******************************888888887766 PP

  ARC6-like_IMS  98 dstlrvrYelvrengkWkI 116
                    +++l+vrY+lvr++g+WkI
     VIMSS12381 686 KDDLTVRYQLVRHQGVWKI 704
                    99****************9 PP



Or compare VIMSS12381 to CDD or PaperBLAST