VIMSS12381 has 714 amino acids
Query: ARC6-like_IMS [M=117] Accession: PF13355.10 Description: ARC6-like, IMS domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.2e-34 103.1 3.4 1e-33 102.6 1.2 2.1 2 VIMSS12381 Domain annotation for each sequence (and alignments): >> VIMSS12381 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -0.4 0.0 0.088 0.088 41 82 .. 143 185 .. 131 192 .. 0.66 2 ! 102.6 1.2 1e-33 1e-33 3 116 .. 591 704 .. 589 705 .. 0.96 Alignments for each domain: == domain 1 score: -0.4 bits; conditional E-value: 0.088 ARC6-like_IMS 41 aaqlkkngsyweyklksl.svesvevsskgpdratveatveEs 82 + +++ + ++y++ s + + ++++d ++ea+++ + VIMSS12381 143 WELSRERWQQQQYEFAATaSLKALARLQQDNDFPALEAEIRQE 185 3344444445555554444999999999999999999999865 PP == domain 2 score: 102.6 bits; conditional E-value: 1e-33 ARC6-like_IMS 3 eliqkWlsaKaealgpehdiesleeiltgpllsqwrkraaqlkkngsyweyklkslsvesvevsskgpdratveatveEsaqlyengqlkenrsy. 97 ++q Wl++K+ a+g+++d+ l+++l+ +ll+q r ra+++++++ y +y++ +l++ +v++++p+ratv+a+veE +q ++ g+++++ s VIMSS12381 591 MVVQGWLDSKKLAFGQNYDVGALQSVLAPNLLAQQRGRAQRDQAQKVYHQYEH-KLQILAYQVNPQDPNRATVTARVEEISQPFTLGNQQQKGSAt 685 79***************************************************.******************************888888887766 PP ARC6-like_IMS 98 dstlrvrYelvrengkWkI 116 +++l+vrY+lvr++g+WkI VIMSS12381 686 KDDLTVRYQLVRHQGVWKI 704 99****************9 PP
Or compare VIMSS12381 to CDD or PaperBLAST