PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS5926912 to PF13427 (AadA_C)

VIMSS5926912 has 263 amino acids

Query:       AadA_C  [M=103]
Accession:   PF13427.10
Description: Aminoglycoside adenylyltransferase, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-31   94.5   0.1    3.5e-31   93.7   0.1    1.4  1  VIMSS5926912  


Domain annotation for each sequence (and alignments):
>> VIMSS5926912  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.7   0.1   3.5e-31   3.5e-31       2     100 ..     153     253 ..     152     256 .. 0.95

  Alignments for each domain:
  == domain 1  score: 93.7 bits;  conditional E-value: 3.5e-31
        AadA_C   2 vldpvpredlvdailadveelleeiee..deryvvLtLaRvlatletgeilsKdeAaewalerlPeeyrpllaeArkaylgeeeekweedeeeveef 96 
                   +++pvp++d+v a+la+v+++++e ++  d +++vL+LaR++++ +tg+i++Kd Aa w+l+rlP+ +rp+la Ar+ayl+ ++ ++  + e ++ef
  VIMSS5926912 153 LFEPVPARDFVAALLATVAQWQAEPDWrdDACNIVLALARIWYSAATGKIAPKDVAAAWVLARLPDAHRPVLAAARAAYLDGDAGAAILSGEPLAEF 249
                   89************************999****************************************************9988888888999999 PP

        AadA_C  97 akym 100
                     y+
  VIMSS5926912 250 IGYA 253
                   8886 PP



Or compare VIMSS5926912 to CDD or PaperBLAST