PaperBLAST – Find papers about a protein or its homologs

 

Align WP_000067268.1 to PF13427 (AadA_C)

WP_000067268.1 has 260 amino acids

Query:       AadA_C  [M=103]
Accession:   PF13427.10
Description: Aminoglycoside adenylyltransferase, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.6e-39  119.4   0.0    5.3e-39  118.8   0.0    1.3  1  WP_000067268.1  


Domain annotation for each sequence (and alignments):
>> WP_000067268.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.8   0.0   5.3e-39   5.3e-39       2     102 ..     153     253 ..     152     254 .. 0.98

  Alignments for each domain:
  == domain 1  score: 118.8 bits;  conditional E-value: 5.3e-39
          AadA_C   2 vldpvpredlvdailadveelleeieederyvvLtLaRvlatletgeilsKdeAaewalerlPeeyrpllaeArkaylgeeeekweedeeeveef 96 
                     +l  vp +d+++ai+++++el+e+i++der+v+LtLaR+++t++tgei+sKd Aaewa++ lP+e+  ll+ Ark y+ge ++kwe+  ++v+++
  WP_000067268.1 153 ILVSVPLTDIRRAIKDSLPELIEGIKGDERNVILTLARMWQTVTTGEITSKDVAAEWAIPLLPKEHVTLLDIARKGYRGECDDKWEGLYSKVKAL 247
                     7899******************************************************************************************* PP

          AadA_C  97 akymla 102
                     +kym++
  WP_000067268.1 248 VKYMKN 253
                     ****97 PP



Or compare WP_000067268.1 to CDD or PaperBLAST