PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::5lpaA to PF13427 (AadA_C)

biolip::5lpaA has 267 amino acids

Query:       AadA_C  [M=103]
Accession:   PF13427.10
Description: Aminoglycoside adenylyltransferase, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.7e-33   98.9   0.1    1.6e-32   98.0   0.1    1.4  1  biolip::5lpaA  


Domain annotation for each sequence (and alignments):
>> biolip::5lpaA  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.0   0.1   1.6e-32   1.6e-32       2     102 ..     152     254 ..     151     255 .. 0.94

  Alignments for each domain:
  == domain 1  score: 98.0 bits;  conditional E-value: 1.6e-32
         AadA_C   2 vldpvpredlvdailadveelleeiee..deryvvLtLaRvlatletgeilsKdeAaewalerlPeeyrpllaeArkaylgeeeekweedeeevee 95 
                    +++p p+++l++a+++ ++ ++++ +   de+++vLtLaR+++tl+tg+++sKd+Aa+w+l++lPe+y+++l+ A+++ylg e+++w+   ++v +
  biolip::5lpaA 152 LFTPAPAAQLLKALRYPLDLWQSTADVqgDEYHIVLTLARIWYTLSTGRFTSKDAAADWLLPQLPEDYAATLRAAQREYLGLEQQDWHILLPAVVR 247
                    8***************9999986554444******************************************************************* PP

         AadA_C  96 fakymla 102
                    f+++++a
  biolip::5lpaA 248 FVDFAKA 254
                    **99875 PP



Or compare biolip::5lpaA to CDD or PaperBLAST