PaperBLAST – Find papers about a protein or its homologs

 

Align WP_001215662.1 to PF13569 (DUF4132)

WP_001215662.1 has 1266 amino acids

Query:       DUF4132  [M=179]
Accession:   PF13569.10
Description: Domain of unknown function (DUF4132)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-54  171.0   0.1    5.4e-54  169.0   0.0    2.0  2  WP_001215662.1  


Domain annotation for each sequence (and alignments):
>> WP_001215662.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.12      0.12     109     169 ..     246     308 ..     193     314 .. 0.82
   2 !  169.0   0.0   5.4e-54   5.4e-54       1     179 []    1000    1183 ..    1000    1183 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.12
         DUF4132 109 riaHPlel.eaeelaa.wqelladyeivQpfkQlfRevyllteeerateeserFaghqvqpkk 169
                     r+ H l+l +++e++    ++la+   + p +Q f  + l +  + a+    r+a ++v++  
  WP_001215662.1 246 RLCHHLSLaSEDEWQRcVDKVLAAITTLSPARQPFAALLLPERPDIANAMALRYADQNVPAMT 308
                     788999997777777624678888899999999999999999999999999999998888765 PP

  == domain 2  score: 169.0 bits;  conditional E-value: 5.4e-54
         DUF4132    1 GkrlkslPaklkkddaela....kelkalkkdlreqasrqrarLeramvtgrrwtaeewqellldhPllrhlvrrLvwgvy.eegklvrafr. 87  
                      Gk lk+lP+++++dd+ la    + +k+lkkd+r++as+q++rLe+am+++rrwtae+++ +l++hPl+rhl+rrL+wgvy ee++l+++fr 
  WP_001215662.1 1000 GKVLKDLPKPNQSDDKTLAtdavNLFKQLKKDVRAIASQQIDRLEQAMCQRRRWTAEQFRLFLVEHPLVRHLTRRLLWGVYtEENTLIACFRv 1092
                      9*****************9**9999********************************************************99999******* PP

         DUF4132   88 .edktladvddetvelkedaevriaHPleleaeelaawqelladyeivQpfkQlfRevyllteeerateeserFaghqvqpkkllallkkrgW 179 
                       ed+t+ d++de ++l++  +++i+H le+++e+ aa+ +  +dye ++pf+Ql+R +y+l ++er+++e+ r++g+ +q+++++ +l++rgW
  WP_001215662.1 1093 aEDSTYSDAQDELFTLPAG-NIGIPHVLEISPESAAAFGQIYTDYEQLPPFRQLDRGYYHLADNERDSHELIRWQGRLCQAGRIV-GLERRGW 1183
                      ******************9.9****************************************************************.******* PP



Or compare WP_001215662.1 to CDD or PaperBLAST