PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS818828 to PF13664 (DUF4149)

VIMSS818828 has 146 amino acids

Query:       DUF4149  [M=102]
Accession:   PF13664.10
Description: Domain of unknown function (DUF4149)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.1e-22   63.9   7.4    7.1e-22   63.9   7.4    1.9  2  VIMSS818828  


Domain annotation for each sequence (and alignments):
>> VIMSS818828  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.9   7.4   7.1e-22   7.1e-22       2      98 ..      12     101 ..      11     105 .. 0.93
   2 ?    0.3   0.2     0.047     0.047       4      26 ..     116     137 ..     109     144 .. 0.57

  Alignments for each domain:
  == domain 1  score: 63.9 bits;  conditional E-value: 7.1e-22
      DUF4149   2 llalllGsllfvtfvvapvlfkaLpraqfgalqsklFpvyfllglalavlllltellrgsellaaaekaqllllavmllltllnafvlePritalke 98 
                  +++l+lG++++ ++++apvlfk+Lp+ q+g++++ lF +  + gla+++ +l+++ ++         + q  ll+ +l + ++n+f ++P i+alk 
  VIMSS818828  12 AATLWLGMQIMAGYIAAPVLFKMLPKMQAGEIAGVLFDILSWSGLAVWGTVLAAAFAAL-------TRRQTALLLFLLSALAANQFLVTPVIEALKY 101
                  579*************************************************9999987.......7889999999999999************996 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.047
      DUF4149   4 alllGsllfvtfvvapvlfkaLp 26 
                  + + G    +tf+++ +l ++L+
  VIMSS818828 116 GMWHGISS-MTFMATALLSAVLS 137
                  44555443.33666666655554 PP



Or compare VIMSS818828 to CDD or PaperBLAST