PaperBLAST – Find papers about a protein or its homologs

 

Align WP_001985194.1 to PF13689 (DUF4154)

WP_001985194.1 has 167 amino acids

Query:       DUF4154  [M=143]
Accession:   PF13689.10
Description: YfiR/HmsC-like
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-28   85.1   0.1    3.3e-28   84.8   0.1    1.1  1  WP_001985194.1  


Domain annotation for each sequence (and alignments):
>> WP_001985194.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.8   0.1   3.3e-28   3.3e-28       8     143 .]      34     164 ..      31     164 .. 0.90

  Alignments for each domain:
  == domain 1  score: 84.8 bits;  conditional E-value: 3.3e-28
         DUF4154   8 lynfakfveWpaeafaselrlcvlgddpfasaleallagkkvggrpievrrlsdvaeaeechvlyisrsearelaailaalkgkpvLtvsdsegf 102
                      + ++++ +W + +++   +lcv+ +++++s +++ +++ + +  +++ ++ +d ++ ++c+++y+s++ ++++++++++++ + +L+ s ++++
  WP_001985194.1  34 TLSILSYSKWENVSTP---TLCVIDNASITSTFQSYIQQLSYN-YRVQTVNAKDFSK-SHCQAVYFSTTPPQQQQNLIQNYPYRSLLSLSINNPE 123
                     6789********9996...7***************88887774.4556666666665.57*********************************** PP

         DUF4154 103 aesggminLvreddrlrfeiNldaarraglkisskLLrLAr 143
                     +e g++++L+ +++  +f++Nlda+++++++i++++L LA+
  WP_001985194.1 124 CEVGSIFCLYNQNNYTTFKVNLDALSHSKVHIDPRVLLLAK 164
                     ***************************************96 PP



Or compare WP_001985194.1 to CDD or PaperBLAST