PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::5eb3A to PF13689 (DUF4154)

biolip::5eb3A has 153 amino acids

Query:       DUF4154  [M=143]
Accession:   PF13689.10
Description: YfiR/HmsC-like
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-37  115.3   0.0    1.4e-37  115.1   0.0    1.0  1  biolip::5eb3A  


Domain annotation for each sequence (and alignments):
>> biolip::5eb3A  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.1   0.0   1.4e-37   1.4e-37       4     143 .]      11     148 ..       8     148 .. 0.91

  Alignments for each domain:
  == domain 1  score: 115.1 bits;  conditional E-value: 1.4e-37
        DUF4154   4 kaaflynfakfveWpaeafaselrlcvlgddpfasaleallagkkvggrpievrrlsdva.ea.eechvlyisrsearelaailaalkgkpvLtvs 97 
                    + ++l++++++v+Wp+e     l+lcv+g++++a+ l + + +  ++gr+++++r +  + ++ + c+v+y++  ++re+++++++l+g+pvL++s
  biolip::5eb3A  11 VSQVLLGIFSYVRWPKEPAV--LQLCVVGPTEYADGLLRGMVQ--ANGRRVHAERRAVDNpDLgTLCNVIYLGVVDERERQQVFRSLAGHPVLSIS 102
                    57899**************9..*****************6665..566778777777777334678****************************** PP

        DUF4154  98 dsegfaesggminLvreddrlrfeiNldaarraglkisskLLrLAr 143
                    ++ ++++ g+m++L+  + r++fe Nld+++r+g+++++++L+LAr
  biolip::5eb3A 103 ERGTECSVGSMFCLNVGGPRITFEANLDSIARSGVRVHPSVLKLAR 148
                    *********************************************7 PP



Or compare biolip::5eb3A to CDD or PaperBLAST