PaperBLAST – Find papers about a protein or its homologs

 

Align WP_003872878.1 to PF13810 (DUF4185)

WP_003872878.1 has 527 amino acids

Query:       DUF4185  [M=309]
Accession:   PF13810.10
Description: Domain of unknown function (DUF4185)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.3e-124  400.1   2.2     4e-124  399.9   2.2    1.1  1  WP_003872878.1  


Domain annotation for each sequence (and alignments):
>> WP_003872878.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  399.9   2.2    4e-124    4e-124       1     309 []     195     523 ..     195     523 .. 0.97

  Alignments for each domain:
  == domain 1  score: 399.9 bits;  conditional E-value: 4e-124
         DUF4185   1 espnrtdkrfgvsgTDLGimwdngkg...rvlvvFGDtfgkgavgsgagdWrsnvllrstdrdlsdgl.........tfdgavgdeggaakqllp 83 
                     ++pn+t +rf++sgTDLGi+wdng+    +vl++FGDtfg ++v+++  +Wr+n+l+rs+d+dls+g+         +++g++++++g +kq+++
  WP_003872878.1 195 NGPNKTLQRFSISGTDLGIAWDNGDPanrQVLMAFGDTFGYCKVHGQ--QWRYNTLFRSNDHDLSHGIhiadgvpndRYSGSPVWAPGLSKQVVN 287
                     589*******************9977777***********9999998..********************************************** PP

         DUF4185  84 sekiagvevtviPtagiavggrqYlsymsvrewgepgewttnysaiakSdDngetWekvpaarrtnsdaqllg....egnenfqmaafvk.ddgy 173
                     + ++a +e+++iPt+g+++g++qY+syms+r+wg++gew+tnysaia+S+Dng++W  +p+++rt+s + ++g    +gnenfqm+af+k +dgy
  WP_003872878.1 288 TIHKAAHETGIIPTSGMSMGRTQYMSYMSIRQWGRDGEWSTNYSAIARSTDNGQNWGIFPTSIRTASPDAIPGagftPGNENFQMGAFLKgNDGY 382
                     ********************************************************************9999899999************9**** PP

         DUF4185 174 vYvfgtpngRsgaayLaRvpeadildlsayeywdggg...Wskkeea.atpvlagpvgElSvryneylgkwvllyldeekesivlrtadspegpw 264
                     +Y+fgtp+gR+gaa+L+Rvp+++++dl++y+yw+g++   W++++++ atp+++gpvgE+S++yn+yl+++++ly+d +++++v rta++p+gpw
  WP_003872878.1 383 IYQFGTPSGRGGAAFLSRVPPNQLPDLTKYQYWNGDNgghWVANNPGaATPIFPGPVGEMSAQYNSYLKQYLVLYTDGGSNDVVARTAPTPQGPW 477
                     *********************************5444457******************************************************* PP

         DUF4185 265 saaktlvssaevpq.lYggyihPwstgkdlyflvSqWntYnvmlmr 309
                     s+++ lvss ++p+ +Y+++ihPws+g+dlyf++S W++Y+vmlm+
  WP_003872878.1 478 SPEQPLVSSFQMPGgIYAPMIHPWSSGRDLYFNLSLWSAYDVMLMH 523
                     **************9******************************7 PP



Or compare WP_003872878.1 to CDD or PaperBLAST