NP_872302.2 has 563 amino acids
Query: DUF4200 [M=119]
Accession: PF13863.10
Description: Domain of unknown function (DUF4200)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.7e-31 93.4 15.8 6.7e-31 93.4 15.8 4.1 4 NP_872302.2
Domain annotation for each sequence (and alignments):
>> NP_872302.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.2 0.3 0.28 0.28 55 73 .. 37 55 .. 34 67 .. 0.57
2 ! 93.4 15.8 6.7e-31 6.7e-31 1 119 [] 112 230 .. 112 230 .. 0.99
3 ? 1.0 9.3 0.027 0.027 7 73 .. 341 407 .. 335 425 .. 0.70
4 ? -1.9 7.9 0.22 0.22 48 94 .. 467 514 .. 456 530 .. 0.49
Alignments for each domain:
== domain 1 score: -2.2 bits; conditional E-value: 0.28
DUF4200 55 keneakreraekkaeeetk 73
kene ++ ek +++ k
NP_872302.2 37 KENEMAAKETEKFMNRNMK 55
4555555555554444444 PP
== domain 2 score: 93.4 bits; conditional E-value: 6.7e-31
DUF4200 1 llekkremflvqealdakkeeierleellkereeelekkeqelkedlvkfdkflkeneakreraekkaeeetkekkekekeikklkaeleelkseisk 98
+++ +r+ fl+++al +k++ i++ e++++ re++l+k+e++l++d+ f++fl+en++++++a+k a++et +k ++++e+kk++ e++++ksei+k
NP_872302.2 112 FINDQRDRFLLEYALSTKRNTIKKFEKDIAMRERQLKKAEKKLQDDALAFEEFLRENDQRSVDALKMAAQETINKLQMTAELKKASMEVQAVKSEIAK 209
7999********************************************************************************************** PP
DUF4200 99 leekleeykkYekfLekvvpk 119
+e l+ey+kY fL +++pk
NP_872302.2 210 TEFLLREYMKYGFFLLQMSPK 230
*****************9986 PP
== domain 3 score: 1.0 bits; conditional E-value: 0.027
DUF4200 7 emflvqealdakkeeierleellkereeelekkeqelkedlvkfdkflkeneakreraekkaeeetk 73
e+ +v ++l++++ + ++++e ee++k+e+ ++++ + +fl e e+ + + ee++
NP_872302.2 341 ELLQVLRELEEQNLTLFQYSQDVDENLEEVNKREKVIQDKTNSNIEFLLEQEKMLKANCVREEEKAA 407
6777778888888888888888888888888888888888888888877777665444433333333 PP
== domain 4 score: -1.9 bits; conditional E-value: 0.22
DUF4200 48 vkfdkflkeneakreraekkaeeetkekkekekeikkl.kaeleelks 94
v++++ ++ ++ ++a++++++++ ++k +++++k+ +++ e+lk+
NP_872302.2 467 VELCDLIESIPKENVEAIERMKQKEWRQKFRDEKMKEKqRHQQERLKA 514
555555555555555555555444433333333333320233333333 PP
Or compare NP_872302.2 to CDD or PaperBLAST