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Align B4E220 to PF13898 (MINDY-3_4_CD)

B4E220 has 329 amino acids

Query:       MINDY-3_4_CD  [M=344]
Accession:   PF13898.10
Description: Deubiquitinating enzyme MINDY-3/4, conserved domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-40  123.4   0.0    7.2e-40  123.0   0.0    1.1  1  B4E220    


Domain annotation for each sequence (and alignments):
>> B4E220  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.0   0.0   7.2e-40   7.2e-40     245     334 ..       2      88 ..       1      93 [. 0.96

  Alignments for each domain:
  == domain 1  score: 123.0 bits;  conditional E-value: 7.2e-40
  MINDY-3_4_CD 245 lqvGsrLKtPklPiWvvcseshysVlFstnrellsdwkaerrfdLyYydglasqqeeirltvdtrakkeeakekseeklipplellirTK 334
                   +qvG+ LKtP++PiWvvcsesh+s+lFs++  ll+dw++er fdLyYydgla+qqe+irlt+dt+++    +e+++++l+pplel+irT 
        B4E220   2 CQVGCFLKTPRFPIWVVCSESHFSILFSLQPGLLRDWRTERLFDLYYYDGLANQQEQIRLTIDTTQT---ISEDTDNDLVPPLELCIRTN 88 
                   8****************************************************************99...8899***************6 PP



Or compare B4E220 to CDD or PaperBLAST