SwissProt::Q9H8M7 has 445 amino acids
Query: MINDY-3_4_CD [M=344]
Accession: PF13898.10
Description: Deubiquitinating enzyme MINDY-3/4, conserved domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-59 186.7 0.0 7.1e-56 175.6 0.0 2.1 2 SwissProt::Q9H8M7
Domain annotation for each sequence (and alignments):
>> SwissProt::Q9H8M7
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 175.6 0.0 7.1e-56 7.1e-56 16 280 .. 29 301 .. 20 316 .. 0.83
2 ! 9.0 0.0 3.4e-05 3.4e-05 285 343 .. 378 437 .. 372 438 .. 0.83
Alignments for each domain:
== domain 1 score: 175.6 bits; conditional E-value: 7.1e-56
MINDY-3_4_CD 16 WkkqgftfretekelaYgLkqkkggprgvlavvQafvlkkLLfekkkkksasleellkpskeeqekaLvaalaeiLwrageek......... 98
W++ gf+f+e+ + +L+q +ggp++v+a vQaf+lkkLLf+++k ++ + s+eeq++ L+ l +iL a ++
SwissProt::Q9H8M7 29 WTQ-GFVFSES-E--GSALEQFEGGPCAVIAPVQAFLLKKLLFSSEK------SSWRDCSEEEQKELLCHTLCDILESACCDHsgsyclvsw 110
776.9****98.3..348**************************953......345567999**************9988777688777777 PP
MINDY-3_4_CD 99 ........kavv.......alpteessflpasdykqdgltekltlfevtsledleeflkehieqFeeekgsGvilllySailsrgiekvred 175
a + + + e+ss+l+ ++ +++ ++ +++sl +l++++ ++ +++ ++ Gv+l+lyS++l++gie+++++
SwissProt::Q9H8M7 111 lrgktteeTASIsgspaesSCQVEHSSALAVEELGFERFHALIQKRSFRSLPELKDAVLDQYSMWGNKF--GVLLFLYSVLLTKGIENIKNE 200
777777662333554444444445556666667777888888888888899999888888887776644..9******************** PP
MINDY-3_4_CD 176 ldsptsallg.eegsctQelvnLlLtGrAssnvfngvveld.sedklatllkGilsrsdiGlLelfehlkllqvGsrLKtPklPiWvvcses 265
+++ ++ l++ g+ +Q l+nLlLtG A+snv++g+ e+ + l Gi++++ +G+L+l+e+l++++vGs+LK+Pk+PiW+v se
SwissProt::Q9H8M7 201 IEDASEPLIDpVYGHGSQSLINLLLTGHAVSNVWDGDRECSgM------KLLGIHEQAAVGFLTLMEALRYCKVGSYLKSPKFPIWIVGSET 286
**********988899999******************999733......599**************************************** PP
MINDY-3_4_CD 266 hysVlFstnrellsd 280
h +V F+++ l+
SwissProt::Q9H8M7 287 HLTVFFAKDMALVAP 301
********9998864 PP
== domain 2 score: 9.0 bits; conditional E-value: 3.4e-05
MINDY-3_4_CD 285 rrfdLyYydglasqq.eeirltvdtrakkeeakekseeklipplellirTKWkeaavdwn 343
++f +y+y+gl++ + +e + v+ +a ++ ++ +p+ ++++TKW+ +++ w+
SwissProt::Q9H8M7 378 ESFTVYHYNGLKQSNyNEKVMYVEGTAVVMGFEDPMLQTDDTPIKRCLQTKWPYIELLWT 437
5799*****987655156679999888877788888888889***********9999995 PP
Or compare SwissProt::Q9H8M7 to CDD or PaperBLAST