VIMSS10100934 has 694 amino acids
Query: PGG [M=116]
Accession: PF13962.10
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.4e-30 89.2 3.1 8.4e-30 89.2 3.1 2.3 2 VIMSS10100934
Domain annotation for each sequence (and alignments):
>> VIMSS10100934
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.8 0.5 0.073 0.073 10 26 .. 178 194 .. 172 196 .. 0.84
2 ! 89.2 3.1 8.4e-30 8.4e-30 3 114 .. 514 621 .. 512 623 .. 0.91
Alignments for each domain:
== domain 1 score: -0.8 bits; conditional E-value: 0.073
PGG 10 tlllvAtLiatvtFaAg 26
+++v +++a vtF+++
VIMSS10100934 178 HTTIVEAFVALVTFSSA 194
57899*********875 PP
== domain 2 score: 89.2 bits; conditional E-value: 8.4e-30
PGG 3 klkearntlllvAtLiatvtFaAgftlPGGywqddskssaGkpilakkkafkvFvvsnaiAlvaSlvavvlllisslvedeakslkkklrvllvll 98
+ ++ +ntlllvA+L+at+tFaAgft+PGG++++ +++ G+++la++++ +F+v++ +A+ +S++++ +l++++l + +++l+v+l ll
VIMSS10100934 514 NNRDYVNTLLLVAALVATMTFAAGFTIPGGFNSS--APHLGRATLATNPTLFIFLVLDILAMQSSVATIGILIWAQL--GDPVLIRSSLHVALPLL 605
567889*************************555..589************************************99..344555678******** PP
PGG 99 vlallsllvAFaagly 114
++all++ +AF++g++
VIMSS10100934 606 LFALLCMPLAFLFGVV 621
*************987 PP
Or compare VIMSS10100934 to CDD or PaperBLAST