VIMSS9927092 has 675 amino acids
Query: PGG [M=116]
Accession: PF13962.10
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-96 304.5 14.1 3.3e-33 100.2 0.0 6.3 7 VIMSS9927092
Domain annotation for each sequence (and alignments):
>> VIMSS9927092
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 4.5 0.1 0.0015 0.0015 98 115 .. 1 18 [. 1 19 [. 0.92
2 ! 34.1 0.0 1.1e-12 1.1e-12 5 48 .. 63 104 .. 59 112 .. 0.83
3 ? -1.7 0.0 0.13 0.13 103 115 .. 115 127 .. 110 128 .. 0.84
4 ! 100.2 0.0 3.3e-33 3.3e-33 2 115 .. 224 335 .. 223 336 .. 0.91
5 ! 93.5 0.0 3.9e-31 3.9e-31 4 114 .. 390 500 .. 387 502 .. 0.89
6 ! 77.6 0.3 3.5e-26 3.5e-26 9 115 .. 505 607 .. 500 608 .. 0.81
7 ? -3.7 0.7 0.57 0.57 98 113 .. 614 629 .. 610 632 .. 0.62
Alignments for each domain:
== domain 1 score: 4.5 bits; conditional E-value: 0.0015
PGG 98 lvlallsllvAFaaglyl 115
+vl+llsl++A+aag+++
VIMSS9927092 1 MVLDLLSLMGAYAAGAFR 18
899************987 PP
== domain 2 score: 34.1 bits; conditional E-value: 1.1e-12
PGG 5 kearntlllvAtLiatvtFaAgftlPGGywqddskssaGkpila 48
++ r++l+l+At++a+vt+ Ag++ PGG+w+ + + +p ++
VIMSS9927092 63 ERLRKVLMLLATFAASVTYVAGLSAPGGFWDHAE--DGHNPAMR 104
6789**************************9985..34555555 PP
== domain 3 score: -1.7 bits; conditional E-value: 0.13
PGG 103 lsllvAFaaglyl 115
sll+A+aag+++
VIMSS9927092 115 SSLLAAYAAGSSR 127
6899******986 PP
== domain 4 score: 100.2 bits; conditional E-value: 3.3e-33
PGG 2 eklkearntlllvAtLiatvtFaAgftlPGGywqdds....k.ssaGkpila.kkk.afkvFvvsnaiAlvaSlvavvlllisslvedeakslkkkl 91
+ l++ar+++ll+AtL++ +t++Ag+++PGG wq+d + ++G+pil +++ ++k+F+++n+iA+vaSlvavvl+ +++l +
VIMSS9927092 224 QALEKARSLVLLLATLATAITYQAGLNPPGGLWQSDGggggGiYKTGDPILLtTNPrRYKAFYYCNSIAFVASLVAVVLVRMKTL---------HHH 311
5789*******************************9999983478*******99999*********************9993333.........346 PP
PGG 92 rvllvllvlallsllvAFaaglyl 115
++l +++vl+l++l++A+aag+++
VIMSS9927092 312 NALEAAMVLDLFGLIGAYAAGSCR 335
799*******************98 PP
== domain 5 score: 93.5 bits; conditional E-value: 3.9e-31
PGG 4 lkearntlllvAtLiatvtFaAgftlPGGywqdds...kssaGkpila.kkk.afkvFvvsnaiAlvaSlvavvlllis.slvedeakslkkklrvl 94
++++r+ lll A+L+at+t++Ag+t+PGG+ ++d+ +++aG+p+l +++ ++ +F+++n++++++S+++++ll+ + +l ++ + ++l
VIMSS9927092 390 VEKRRKRLLLFAILAATITYQAGLTPPGGFLDQDDsrtGRHAGDPVLLnNYPrRYTAFFYCNSVSFMLSIALIILLV-NpNL----YRPAIR-SNAL 480
6899**************************88888886589*******7788*************************.4355....555555.99** PP
PGG 95 lvllvlallsllvAFaagly 114
+v++ + l+++++ +aag++
VIMSS9927092 481 SVCTAAGLIGIMGGYAAGCT 500
*****************975 PP
== domain 6 score: 77.6 bits; conditional E-value: 3.5e-26
PGG 9 ntlllvAtLiatvtFaAgftlPGGywqdds.kssaGkpila.kkk.afkvFvvsnaiAlvaSlvavvlllisslvedeakslkkklrvllvllvlal 102
+++ + A ++ ++ Ag+ +PGG wq+++ ++aG+p+++ ++ ++ +F++sn++++vaS+v++vlll +sl + lrv+++++vl+l
VIMSS9927092 505 TSIYIFALAAVVLSTVAGLAPPGGAWQSNDgTHTAGDPVMHdYRRaRYLAFFYSNSTSFVASVVVIVLLLPESL----QGW---WLRVMNTTIVLDL 594
34444444444445569************95489*******76668************************3333....333...599********** PP
PGG 103 lsllvAFaaglyl 115
l+ll+A+aag+++
VIMSS9927092 595 LGLLIAYAAGSCR 607
***********98 PP
== domain 7 score: -3.7 bits; conditional E-value: 0.57
PGG 98 lvlallsllvAFaagl 113
v al+ ++A++a +
VIMSS9927092 614 YVSALVLAVLAYFAIH 629
4556666677777655 PP
Or compare VIMSS9927092 to CDD or PaperBLAST