NP_055625.4 has 3117 amino acids
Query: DUF4378 [M=164]
Accession: PF14309.9
Description: Domain of unknown function (DUF4378)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.7e-10 27.0 1.4 2.7e-10 27.0 1.4 3.7 3 NP_055625.4
Domain annotation for each sequence (and alignments):
>> NP_055625.4
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.3 0.4 0.28 0.28 96 140 .. 647 734 .. 581 740 .. 0.48
2 ? -3.8 0.2 0.82 0.82 101 144 .. 2665 2702 .. 2649 2721 .. 0.56
3 ! 27.0 1.4 2.7e-10 2.7e-10 52 163 .. 2964 3098 .. 2922 3099 .. 0.84
Alignments for each domain:
== domain 1 score: -2.3 bits; conditional E-value: 0.28
DUF4378 96 rkkklsgeqlleevwseie.........................................swlsseelvvde....lvdkdlssrsgkwl 140
++++s+ + l+e +s++ s ss ++++ e l +kdl+++ w+
NP_055625.4 647 PPSEPSATRRLQETYSKLLlektlleepshqhvtqetqakpgyqpsgesdkenkvqerppSASSSSDMSLSEppqpLARKDLMES--TWM 734
4444444444555554444444444444344444444444444444443333333222222222225555556666666666655..665 PP
== domain 2 score: -3.8 bits; conditional E-value: 0.82
DUF4378 101 sgeqlleevwseieswlsseelvvdelvdkdlssrsgkwldled 144
++++l+ + ++++ e+ ++d+ +++l+++ ++ + +
NP_055625.4 2665 ENKDLISDATEKVSI--AAEDDTLDNTFSEELEKQ-QQ---FTE 2702
445555555555555..444777777777777776.33...333 PP
== domain 3 score: 27.0 bits; conditional E-value: 2.7e-10
DUF4378 52 erresrserklLFDlvneiLveilal.skrssaeppskvssakkr.rkkklsgeqlleevwseie.................swlsse......el 122
e++ +r ++ +FDl ei ei+a + +++k + +++ ++ +++ + l+e+ s i +w ++
NP_055625.4 2964 ESTSKRVYKQAVFDLTKEIFEEIFAEdP-NLNQPVWMKPCRINSSyFRR-VKNPNNLDEIKSFIAsevlklfslkkepnhktDWQKMMkfgrkkRD 3057
55789999****************9844.55667888888888886666.7888889********9999999999999988856666578889999 PP
DUF4378 123 vvdelvdkdlssrsgkwldledeveeigleierlilkdLve 163
vd+++ ++l +++ +w++++++ ++ +++++ i+++L++
NP_055625.4 3058 RVDHILVQELHEEEAQWVNYDEDELCVKMQLADGIFETLIK 3098
9**************************************97 PP
Or compare NP_055625.4 to CDD or PaperBLAST