NP_177556.3 has 1025 amino acids
Query: DUF4378 [M=164]
Accession: PF14309.9
Description: Domain of unknown function (DUF4378)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.7e-46 144.1 1.0 2.7e-46 144.1 1.0 2.6 2 NP_177556.3
Domain annotation for each sequence (and alignments):
>> NP_177556.3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.7 0.2 0.091 0.091 91 115 .. 623 648 .. 587 683 .. 0.62
2 ! 144.1 1.0 2.7e-46 2.7e-46 1 164 [] 820 1002 .. 820 1002 .. 0.85
Alignments for each domain:
== domain 1 score: -0.7 bits; conditional E-value: 0.091
DUF4378 91 sakkr.rkkklsgeqlleevwseies 115
+++ +++++g++ l++v ++++
NP_177556.3 623 ESTSPgGRRRPKGQKSLQQVDDQLSQ 648
22222344456666666666666665 PP
== domain 2 score: 144.1 bits; conditional E-value: 2.7e-46
DUF4378 1 dfeYvreiLlasglllkd..sdellsrwhssespidpslfeelEekkgss........sekerresrserklLFDlvneiLveilal.skrssaep 85
d++Y++eiLlasglll+d s+ + h s++pi+p+lf +lE++kgss ++k ++++++rkl+FDlvneiLve+la+ + +++p
NP_177556.3 820 DHRYISEILLASGLLLRDlgSGLTTFQLHPSGHPINPELFFVLEQTKGSStthllhkeESKVLKNEKLNRKLVFDLVNEILVEKLASvE--ATTNP 913
79****************886666777888888**************999*******9888889**********************844..45777 PP
DUF4378 86 pskvssakkr.rkkklsgeqlleevwseie....swlsse............elvvdelvdkdlssrsgkwldledeveeigleierlilkdLveE 164
+k+ + +kk++s++qll+e++s ie + + + + +++++d+ rsg+w d++ e+++++l++erl++kdLv+E
NP_177556.3 914 LMKS---YAKvTKKAVSAQQLLKELCSAIEtqqkQ----AtkrsenflleeeDDFLKSILAEDVTIRSGNWADFSGEMSGLVLDVERLVFKDLVNE 1002
7663...33445899***************55550....3455554444445666666************************************99 PP
Or compare NP_177556.3 to CDD or PaperBLAST