VIMSS3373112 has 642 amino acids
Query: RACo_C_ter [M=261]
Accession: PF14574.10
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-108 347.2 2.1 3.6e-108 346.6 0.1 2.2 2 VIMSS3373112
Domain annotation for each sequence (and alignments):
>> VIMSS3373112
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.8 0.3 0.037 0.037 71 109 .. 215 248 .. 182 306 .. 0.51
2 ! 346.6 0.1 3.6e-108 3.6e-108 1 260 [. 376 636 .. 376 637 .. 0.99
Alignments for each domain:
== domain 1 score: -0.8 bits; conditional E-value: 0.037
RACo_C_ter 71 pkGicGsGiidliaelleagiidkkgklnkelkserire 109
+ i + ++ ++ l++++++dk + n + i+
VIMSS3373112 215 AIDIGTTSVVVCLVDLYSKEVVDKASSGNAQ-----IKY 248
5555556666666666666666655444332.....333 PP
== domain 2 score: 346.6 bits; conditional E-value: 3.6e-108
RACo_C_ter 1 eislliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignekpkGicGsGiidliaelleagiidkkgk 97
e++l+iD+GTN+Eiv+gnkd +++++++aGPA+EGg+i+cGmrA+ gAie+v id++tle++lk+i++ +p+GicGsGiidli++++++g+id++gk
VIMSS3373112 376 ENVLFIDLGTNGEIVFGNKDYMMSCACSAGPAFEGGGISCGMRASAGAIEKVIIDKDTLEPTLKIIDECAPVGICGSGIIDLICQMITKGVIDRRGK 472
678********************************************************************************************** PP
RACo_C_ter 98 lnkelkserireee.eteeyvlvlaeesetekdivitekDidelirakaAiyagvktLleevglevedidkvylaGafGsyidlekAitiGllPdle 193
+ ++l+++r+r +e e+ eyvl+++ee + e+div++e Did++irak+Aiy+g+ tL++++g++++ +d+vy+aG++G+ +d+e++i iGllPd++
VIMSS3373112 473 IYRDLDNKRVRFNEhEIGEYVLAFKEEFDLENDIVVNEVDIDNFIRAKGAIYSGAYTLVDSLGMDFSILDRVYIAGGIGNNLDIENSIIIGLLPDID 569
***********9876999******************************************************************************* PP
RACo_C_ter 194 lekvkqvGNtslagAraallsreareeleeiarkityielavekkFmeefvaalflphtdlelfpsv 260
+ek++++GN+sl g++ al+s++a ++leei ++ity+el+v +++m+ef++a+flpht++e+fp+
VIMSS3373112 570 REKFTYIGNSSLVGSYLALISKDAKNKLEEIGNQITYVELSVYPSYMDEFISACFLPHTNIEQFPTA 636
****************************************************************986 PP
Or compare VIMSS3373112 to CDD or PaperBLAST