VIMSS6821238 has 535 amino acids
Query: RACo_C_ter [M=261]
Accession: PF14574.10
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-98 315.5 0.2 3.9e-98 313.7 0.0 1.9 3 VIMSS6821238
Domain annotation for each sequence (and alignments):
>> VIMSS6821238
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.3 0.0 0.2 0.2 43 70 .. 9 36 .. 8 57 .. 0.78
2 ? -1.5 0.1 0.057 0.057 70 122 .. 105 162 .. 68 183 .. 0.65
3 ! 313.7 0.0 3.9e-98 3.9e-98 1 261 [] 276 524 .. 276 524 .. 0.99
Alignments for each domain:
== domain 1 score: -3.3 bits; conditional E-value: 0.2
RACo_C_ter 43 rAapgAierveidpetlevelkvignek 70
A + +++++e+dp t ++++k++++++
VIMSS6821238 9 LADQRVVSDFELDPLTRKISIKILQGHE 36
5788899999999999999999987643 PP
== domain 2 score: -1.5 bits; conditional E-value: 0.057
RACo_C_ter 70 k..........pkGicGsGiidliaelleagiidkkgklnkelkserireeeeteeyvlvlae 122
+ + i + ++ + ++++ ii k n + i+ +++ + +++ +e
VIMSS6821238 105 PgdhtdahvglAIDIGTTTVVVYLVNMVNGDIIAKASDYNGQ-----IKLGDDILSRIMAARE 162
444445555555566666677777777777777776666444.....5555555555555555 PP
== domain 3 score: 313.7 bits; conditional E-value: 3.9e-98
RACo_C_ter 1 eislliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignekpkGicGsGiidliaelleagiidkkgk 97
e+sll+DiGTN+E +lgn++wl+ +++aaGPAlEGg +++G+rA++gA+++v+id+e+ +v++++i+n++++GicGsG+id +ael+++g+i++ +
VIMSS6821238 276 EVSLLVDIGTNGEFILGNQEWLVGCAGAAGPALEGGVTEWGIRAEQGAVDQVSIDSEH-HVRYTTIDNAPARGICGSGLIDSLAELFLNGLINRAAR 371
789******************************************************9.************************************** PP
RACo_C_ter 98 lnkelkserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagvktLleevglevedidkvylaGafGsyidlekAitiGllPdlel 194
+ ++++e++++v+a es+t+k+i+i++kDi++l+r+k+A++a++++L+e+vg+++e+i k+y aGafG+y+ +e+AitiGl+Pdl++
VIMSS6821238 372 F-----------TDGRERFTIVPAGESATGKEIFISQKDINSLMRTKGAVNAALEVLMESVGCQWEEIAKFYAAGAFGQYLPIESAITIGLYPDLPR 457
*...........567999******************************************************************************* PP
RACo_C_ter 195 ekvkqvGNtslagAraallsreareeleeiarkityielavekkFmeefvaalflphtdlelfpsvk 261
e++ +GN+s++gAr++lls+++r+e+eeia kity+e++++++Fm+++ + flpht+++lfpsvk
VIMSS6821238 458 EQMLRLGNSSGEGARQVLLSHSKRQEIEEIAGKITYFEMNASSSFMDKYGGSRFLPHTNMDLFPSVK 524
****************************************************************986 PP
Or compare VIMSS6821238 to CDD or PaperBLAST