biolip::3zyyX has 628 amino acids
Query: RACo_C_ter [M=261]
Accession: PF14574.10
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4e-115 369.4 1.4 7.5e-115 368.5 0.3 2.0 2 biolip::3zyyX
Domain annotation for each sequence (and alignments):
>> biolip::3zyyX
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.6 0.0 0.064 0.064 147 173 .. 270 296 .. 259 300 .. 0.82
2 ! 368.5 0.3 7.5e-115 7.5e-115 1 260 [. 369 628 .] 369 628 .] 0.99
Alignments for each domain:
== domain 1 score: -1.6 bits; conditional E-value: 0.064
RACo_C_ter 147 iyagvktLleevglevedidkvylaGa 173
i+ + L++e g+e ++i ++aG
biolip::3zyyX 270 INELIFQLCKEHGVEKKEIMAAVVAGN 296
5556778999***************97 PP
== domain 2 score: 368.5 bits; conditional E-value: 7.5e-115
RACo_C_ter 1 eislliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignekpkGicGsGiidliaelleagiidkkg 96
ei+l+iDiGTN+E+vlgnkdwl++++++aGPA+EG++ik+GmrA++gAierv+i+++ l+v+++++g+ +p+GicGsG+idl+a+l +agiid++g
biolip::3zyyX 369 EITLFIDIGTNGEMVLGNKDWLVTCACSAGPAFEGSGIKHGMRAMQGAIERVSISEAGLKVKYQTVGGIPPVGICGSGLIDLLANLKRAGIIDRSG 464
79********************************************************************************************** PP
RACo_C_ter 97 klnkelkserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagvktLleevglevedidkvylaGafGsyidlekAitiGllPdl 192
k+++++++erire e+ e+vl++a+es+++kdivite+Di++lirakaAi+agv+t+l v+l +e id+v++aG+fG+y+++++AitiGllPd+
biolip::3zyyX 465 KIDRTVNKERIREGEDGLEFVLAWANESGNNKDIVITEADIQNLIRAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLPDI 560
************************************************************************************************ PP
RACo_C_ter 193 elekvkqvGNtslagAraallsreareeleeiarkityielavekkFmeefvaalflphtdlelfpsv 260
+++k+++vGN+sl+gAr+allsr+a++e++eiark+ty+el+v ++Fm+efv+a f+phtdl+lfpsv
biolip::3zyyX 561 DINKFSYVGNSSLKGARKALLSRKACAEVKEIARKMTYLELSVGTTFMDEFVSASFIPHTDLHLFPSV 628
******************************************************************86 PP
Or compare biolip::3zyyX to CDD or PaperBLAST