PaperBLAST – Find papers about a protein or its homologs

 

Align NP_001028720.1 to PF14737 (DUF4470)

NP_001028720.1 has 586 amino acids

Query:       DUF4470  [M=97]
Accession:   PF14737.10
Description: Domain of unknown function (DUF4470)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-27   81.3   0.0    3.6e-27   80.7   0.0    1.3  1  NP_001028720.1  


Domain annotation for each sequence (and alignments):
>> NP_001028720.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.7   0.0   3.6e-27   3.6e-27       1      97 []      16     122 ..      16     122 .. 0.91

  Alignments for each domain:
  == domain 1  score: 80.7 bits;  conditional E-value: 3.6e-27
         DUF4470   1 lwGntpaldllkllpkn......ege.....dlniLllgsgDlRnvlkTiaslpetysrklditlndsepevvaRnillllillesddsleleea 84 
                     +wG +paldl+ + p+       +       +l+ Lllgs D R++l+T+a+      r+++++++++++e vaR++l+++++le++++++l+e+
  NP_001028720.1  16 WWGLSPALDLQAESPPVdpdsqsK-TerkvpELDALLLGSVDGRHMLRTLARAALWPLRSFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQER 109
                     8************84445877651.155689**********************888899************************************ PP

         DUF4470  85 aelllhlwysall 97 
                     +e++l+lw++all
  NP_001028720.1 110 SETFLELWGNALL 122
                     **********986 PP



Or compare NP_001028720.1 to CDD or PaperBLAST