PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::L0R6Q1 to PF15054 (DUF4535)

SwissProt::L0R6Q1 has 103 amino acids

Query:       DUF4535  [M=45]
Accession:   PF15054.10
Description: Domain of unknown function (DUF4535)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
      1e-13   37.1   0.1    2.1e-13   36.1   0.1    1.6  1  SwissProt::L0R6Q1  


Domain annotation for each sequence (and alignments):
>> SwissProt::L0R6Q1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.1   2.1e-13   2.1e-13       3      33 ..      66      96 ..      64     100 .. 0.88

  Alignments for each domain:
  == domain 1  score: 36.1 bits;  conditional E-value: 2.1e-13
            DUF4535  3 fsFglGtycGiYvAQNYeVPnvkklantgle 33
                       + F +Gt +GiY AQ Y VPnv+k+ ++ l+
  SwissProt::L0R6Q1 66 LGFAVGTCTGIYAAQAYAVPNVEKTLRDYLQ 96
                       569*********************9988876 PP



Or compare SwissProt::L0R6Q1 to CDD or PaperBLAST