PaperBLAST – Find papers about a protein or its homologs

 

Align NP_001155018.1 to PF15232 (DUF4585)

NP_001155018.1 has 1015 amino acids

Query:       DUF4585  [M=73]
Accession:   PF15232.10
Description: Domain of unknown function (DUF4585)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.5e-28   82.4   2.4    4.1e-27   80.4   2.4    2.1  1  NP_001155018.1  


Domain annotation for each sequence (and alignments):
>> NP_001155018.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.4   2.4   4.1e-27   4.1e-27       4      73 .]     877     941 ..     874     944 .. 0.92

  Alignments for each domain:
  == domain 1  score: 80.4 bits;  conditional E-value: 4.1e-27
         DUF4585   4 atqrklLlDpesGryyvvdlPlqvktktlfDpetGqYVevllpsaesevseaapvelllsplalgPgayp 73 
                     a  +k+L+DpesGryy+v++P+q++++ lfDpe+GqYVevllp     +s++ p++ +++plalg g+yp
  NP_001155018.1 877 APLGKVLVDPESGRYYFVEAPRQPRLRVLFDPESGQYVEVLLP-----PSSPGPPHRVYTPLALGLGLYP 941
                     5568***************************************.....799************9877775 PP



Or compare NP_001155018.1 to CDD or PaperBLAST