PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::M0RD54 to PF15232 (DUF4585)

SwissProt::M0RD54 has 1422 amino acids

Query:       DUF4585  [M=73]
Accession:   PF15232.10
Description: Domain of unknown function (DUF4585)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    6.7e-31   92.5   6.3    2.4e-30   90.8   6.3    2.0  1  SwissProt::M0RD54  


Domain annotation for each sequence (and alignments):
>> SwissProt::M0RD54  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.8   6.3   2.4e-30   2.4e-30       1      73 []    1260    1331 ..    1260    1331 .. 0.97

  Alignments for each domain:
  == domain 1  score: 90.8 bits;  conditional E-value: 2.4e-30
            DUF4585    1 saaatqrklLlDpesGryyvvdlPlqvktktlfDpetGqYVevllpsaesevseaapvelllsplalgPgayp 73  
                         +++atq k+L+Dp+sG+y+v+d+Plqvk+kt++DpetG+YV+v++ps+e+++se+   ++l++p+ l+Pg+ p
  SwissProt::M0RD54 1260 PYPATQ-KVLQDPQSGQYFVFDMPLQVKIKTFYDPETGKYVKVSVPSSEEDPSEPPLQDALTAPYLLYPGFQP 1331
                         689999.***************************************************************976 PP



Or compare SwissProt::M0RD54 to CDD or PaperBLAST