PaperBLAST – Find papers about a protein or its homologs

 

Align XP_005269535.1 to PF15232 (DUF4585)

XP_005269535.1 has 1435 amino acids

Query:       DUF4585  [M=73]
Accession:   PF15232.10
Description: Domain of unknown function (DUF4585)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      3e-32   96.8   5.0    8.5e-32   95.4   5.0    1.8  1  XP_005269535.1  


Domain annotation for each sequence (and alignments):
>> XP_005269535.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.4   5.0   8.5e-32   8.5e-32       2      73 .]    1270    1340 ..    1269    1340 .. 0.97

  Alignments for each domain:
  == domain 1  score: 95.4 bits;  conditional E-value: 8.5e-32
         DUF4585    2 aaatqrklLlDpesGryyvvdlPlqvktktlfDpetGqYVevllpsaesevseaapvelllsplalgPgayp 73  
                      ++atq k+L+Dp+sG+y+v+dlPlqvk+kt++DpetG+YV+v++ps+e+ ++e+ p+++l++p++l+Pg+ p
  XP_005269535.1 1270 YPATQ-KVLQDPQSGEYFVFDLPLQVKIKTFYDPETGKYVKVSIPSSEGASPEPPPPDALAAPYVLYPGFQP 1340
                      78999.***************************************************************976 PP



Or compare XP_005269535.1 to CDD or PaperBLAST