PaperBLAST – Find papers about a protein or its homologs

 

Align XP_011490829.2 to PF15232 (DUF4585)

XP_011490829.2 has 1371 amino acids

Query:       DUF4585  [M=73]
Accession:   PF15232.10
Description: Domain of unknown function (DUF4585)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-34  104.6   4.6    3.5e-34  103.0   4.6    1.9  1  XP_011490829.2  


Domain annotation for each sequence (and alignments):
>> XP_011490829.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.0   4.6   3.5e-34   3.5e-34       2      73 .]    1183    1252 ..    1182    1252 .. 0.97

  Alignments for each domain:
  == domain 1  score: 103.0 bits;  conditional E-value: 3.5e-34
         DUF4585    2 aaatqrklLlDpesGryyvvdlPlqvktktlfDpetGqYVevllpsaesevseaapvelllsplalgPgayp 73  
                      a++tqrk+LlDp++G+yy+vd+Plqv+tk+lfDp+tGqYVev++p+  s v++++pv+l+lsplal+P+ay+
  XP_011490829.2 1183 APQTQRKMLLDPTTGHYYLVDTPLQVTTKKLFDPDTGQYVEVPMPH--SPVAPVTPVHLSLSPLALSPPAYT 1252
                      79*******************************************7..9********************996 PP



Or compare XP_011490829.2 to CDD or PaperBLAST