PaperBLAST – Find papers about a protein or its homologs

 

Align NP_001018611.1 to PF15378 (DUF4605)

NP_001018611.1 has 137 amino acids

Query:       DUF4605  [M=59]
Accession:   PF15378.10
Description: Domain of unknown function (DUF4605)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-28   84.6   6.7      2e-28   84.3   6.7    1.1  1  NP_001018611.1  


Domain annotation for each sequence (and alignments):
>> NP_001018611.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.3   6.7     2e-28     2e-28       1      59 []      78     136 ..      78     136 .. 0.98

  Alignments for each domain:
  == domain 1  score: 84.3 bits;  conditional E-value: 2e-28
         DUF4605   1 svfdelNkqLlslGfprwnvGekvvePvvlvlllllllflGlrGlllvgvlcfviqlsq 59 
                     ++f+elNk+L++lGf+++++Gek+vePvv+++++lll+flG+++l+lvg+lc++i+++q
  NP_001018611.1  78 TLFGELNKCLRGLGFTQLYFGEKIVEPVVVLVFWLLLWFLGIQALGLVGTLCIIIIYIQ 136
                     68******************************************************997 PP



Or compare NP_001018611.1 to CDD or PaperBLAST