PaperBLAST – Find papers about a protein or its homologs

 

Align Q53QW1 to PF15727 (DUF4678)

Q53QW1 has 395 amino acids

Query:       DUF4678  [M=381]
Accession:   PF15727.9
Description: Domain of unknown function (DUF4678)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.4e-201  653.1  21.7   9.5e-201  653.0  21.7    1.0  1  Q53QW1    


Domain annotation for each sequence (and alignments):
>> Q53QW1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  653.0  21.7  9.5e-201  9.5e-201       2     381 .]       7     394 ..       6     394 .. 1.00

  Alignments for each domain:
  == domain 1  score: 653.0 bits;  conditional E-value: 9.5e-201
  DUF4678   2 slgtvadsrssdspaggsqsqvsltadvlvassaaasaerqdvdqasiksatseatsasGdkdkeevaaeksqe.pkevtalllrqapealqvsvslqnqaw 102
              +lg+v+dsrs+dspag++q qv+ltadvl++ss++as+++qd+dqas+k+at++a+s+sGdkdk++v++e++q+ p+++t+ll++q+p++lqvs+slqn+aw
   Q53QW1   7 PLGNVDDSRSKDSPAGEPQGQVPLTADVLAVSSSVASTDWQDIDQASFKTATPRAISTSGDKDKSAVVPEHGQKtPRKITPLLPSQNPSPLQVSMSLQNPAW 108
              799*************************************************************************************************** PP

  DUF4678 103 drpvqdarttqslvvlqhdsLvkektpqtasvpdreqelapsapsAeaqstenveaqPavstad.....akdqldtqaastteaaeeksesPeAlspdteal 199
              dr+vqdart+qslvv++++ L+k+k++q+asvp+re+e+apsapsAe+qst+++eaqP++s+ad     a++q+++qaastt++aeek+e+P+A +p++eal
   Q53QW1 109 DRQVQDARTSQSLVVFPSHLLGKDKMSQMASVPEREPESAPSAPSAELQSTQHMEAQPVESDADhvtagANGQHGPQAASTTKSAEEKAEHPKAPHPEAEAL 210
              ****************************************************************************************************** PP

  DUF4678 200 psaeskvvteedlvdssgdlqapsfppspegsvsaspgpqevALgrrpLDssLYmAseEnnYmrsmtsLLggGEGsissLADiLvWsEttmgm..AtGlLas 299
              ps+es v++++++vds+gdlq+++fpp+p+gsvs+spgp+evALgrrpLDssLY+AseEn+YmrsmtsLL++GEGsissLADiLvWsEttmgm  AtG+L+s
   Q53QW1 211 PSDESPVAMGANVVDSLGDLQTWFFPPPPAGSVSPSPGPHEVALGRRPLDSSLYTASEENSYMRSMTSLLDRGEGSISSLADILVWSETTMGMaiATGFLDS 312
              *********************************************************************************************99******* PP

  DUF4678 300 grssvtdlLhstGpsLRsvssilgsassafssgLvaGtgsalrsvtrmLEtvErRtvEGirsAvryltshLtprraqagpnc 381
              g+s+v+dlLhs+GpsLRsv+s++gs+ssafssgLv+Gt+salr++tr+LEtvE+RtvEGirsA+ryltshLtpr+aqa+pn+
   Q53QW1 313 GHSTVADLLHSSGPSLRSVPSLVGSVSSAFSSGLVSGTSSALRTITRVLETVEQRTVEGIRSAMRYLTSHLTPRQAQADPNY 394
              ********************************************************************************96 PP



Or compare Q53QW1 to CDD or PaperBLAST