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Align NP_899099.2 to PF15787 (DUF4704)

NP_899099.2 has 2750 amino acids

Query:       DUF4704  [M=486]
Accession:   PF15787.9
Description: Neurobeachin/BDCP, DUF4704 alpha solenoid region
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.1e-37  114.1   0.2    5.4e-36  110.4   0.2    2.4  1  NP_899099.2  


Domain annotation for each sequence (and alignments):
>> NP_899099.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.4   0.2   5.4e-36   5.4e-36      18     443 ..     876    1300 ..     872    1318 .. 0.78

  Alignments for each domain:
  == domain 1  score: 110.4 bits;  conditional E-value: 5.4e-36
      DUF4704   18 vvthsiqsilesvGGiqvLfPLfsqld.qaeedeqlege...........................seadeklcatlleliaelleesetnqqqll 85  
                   v t ++++ +++vGG+ vL+PL++++  q++e e  + e                           +  + + +a  l ++ + l++++ nq+ l+
  NP_899099.2  876 VETWDVKDVVNCVGGMGVLLPLLERVAvQPQEAEAGPCEthdlvgpeltsgrntqglllplgksseDRMERNAVAAFLLMLRNFLQNHTVNQESLV 971 
                   77899*******************986255555555555789********************9987677778888999999*************** PP

      DUF4704   86 rlkGflvlsflLqsvspkhLtlevlsalksllkvlkslanselLlkdlvdsillnpklWiytdyeVQkeLysyLatdfvsdkkiltnlrrvstVlr 181 
                   +++G+++++ lL +v+++ + ++vl + + l+++     ++ +Ll  l +++l+n++lW  +d++V     +y+++++ ++    ++lr+  +V+ 
  NP_899099.2  972 QCQGPAIIGALLRKVPSSAMDMNVLMSAQLLMEQAAA-DGGGPLLYLLYQHLLFNFHLWTLSDFAVRLGHIQYMSSMVREHR---QKLRKKYGVQF 1063
                   ******************************9999955.369*************************************9997...99********* PP

      DUF4704  182 lldilkqfYwvenaksksgvtskslleeRp.sqeeilklrallLslieqlvrksseisesevkalinyletvqddenvedvLelvirllseks..a 274 
                   lld+l+  Y  +               eRp + +++ ++   lL l+++ ++++   s +++++++n+l+ + dd +v   Lel+++ll  ++   
  NP_899099.2 1064 LLDALRTHYSPQ--------------RERPlAADDLRTVQTSLLGLVREFLVRN--FSVEDMQVVLNFLAATGDDGQVVGTLELLLTLLQGSPvqD 1143
                   *********965..............367867899*******************..************************************9967 PP

      DUF4704  275 sflealdskggieiflkLLsreseaiRl..laLkllgklllrspv.krksevmeaknlfs.liserLllfseeltdktynvLfevllekaspkivl 366 
                    ++  l + g +e++l LL r++    l     k+l +l  +  + +r+++ ++ ++  +  +  +L+ +s  ++ ++++ L++++++ + p++v 
  NP_899099.2 1144 PLAAFLLELGNLEVLLALLVRPKSTPLLtdRVCKILRRLQQNERLpERNRQRIRLHDCGLqGLVASLSEES--ISPQLCQGLYKLFVGTV-PQVVS 1236
                   78888889999********9987652221123455555554433223444444444433335555666666..66666666666666543.22221 PP

      DUF4704  367 ekhsepekssklelPqilkviakllsqskdsesielrkkiLsdllvLlksnrenrrallqmsvWqewLvalaklaei 443 
                          +  +l    +l v+   l+   d   +++r +i  +l  L+  +++ +r l  +++Wq+ L+ l  l+ +
  NP_899099.2 1237 P------DCLNLS--DLLAVVQLSLQ--AD---LSVRLDICRQLFYLIYGQPDVVRLLARQAGWQDVLTRLYVLEAA 1300
                   1......111222..23333322222..22...45677777777777777777777777777777777776666555 PP



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