XP_006502410.1 has 2871 amino acids
Query: DUF4704 [M=486]
Accession: PF15787.9
Description: Neurobeachin/BDCP, DUF4704 alpha solenoid region
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-178 580.6 13.3 2.2e-178 580.0 13.3 1.3 1 XP_006502410.1
Domain annotation for each sequence (and alignments):
>> XP_006502410.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 580.0 13.3 2.2e-178 2.2e-178 2 486 .] 442 921 .. 441 921 .. 0.99
Alignments for each domain:
== domain 1 score: 580.0 bits; conditional E-value: 2.2e-178
DUF4704 2 advhspealilngvqlvvthsiqsilesvGGiqvLfPLfsqldqaeedeqlegeseadeklcatlleliaelleesetnqqqllrlkGflvlsfl 96
++vhsp+al+l++v++v thsiqs+++s+GG+qvLfPLf+qld+++ + + e+d ++c tll +i+ell++s ++q+q+l +kGflv+++
XP_006502410.1 442 IFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLFAQLDYKQYLS----D-EVDLTICTTLLAFIMELLKNSIAMQEQMLACKGFLVIGYS 531
799*******************************************995....4.69************************************** PP
DUF4704 97 LqsvspkhLtlevlsalksllkvlkslanselLlkdlvdsillnpklWiytdyeVQkeLysyLatdfvsdkkiltnlrrvstVlrlldilkqfYw 191
L+++s++h ++ vl+ + +k+l++l n+ +Llk+l+d+illnp++Wi+t+ +VQ Ly+yL+t+f+ + +i++++rrv tVl ++++lk++Yw
XP_006502410.1 532 LEKSSKSHVSRAVLELCLAFSKYLSNLQNGMPLLKQLCDHILLNPAVWIHTPAKVQLMLYTYLSTEFIGTVNIYNTIRRVGTVLLIMHTLKYYYW 626
***************************99****************************************************************** PP
DUF4704 192 venaksksgvtskslleeRpsqeeilklrallLslieqlvrksseisesevkalinyletvqddenvedvLelvirllseksasflealdskggi 286
+n++ +sg+t+k+l+++Rp+q+eil+lra+lL +i+qlv+k s+++e+e++a++nyl t+++d+n++dvL+l+++l++e+++s+++a+d+++g+
XP_006502410.1 627 AVNPQDRSGITPKGLDGPRPNQKEILSLRAFLLMFIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMAEHPNSMIPAFDQRNGL 721
*********************************************************************************************** PP
DUF4704 287 eiflkLLsreseaiRllaLkllgklllrspvkrksevmeaknlfsliserLllfseeltdktynvLfevllekaspkivlekhsepekssklelP 381
+++ kLL+++se iR++aLk lg++l+++ krk evm + lfsl++erL+l ++ +t+++ynvLfe+l+e++ ++++ ++h p++++k+++P
XP_006502410.1 722 RVIYKLLASKSEGIRVQALKALGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLITMTMYNVLFEILIEQICTQVIHKQHPDPDSTVKIQNP 816
*********************************************************************************************** PP
DUF4704 382 qilkviakllsqskdses.ielrkkiLsdllvLlksnrenrrallqmsvWqewLvalaklaeikeeeeseikelvielfkvLlvhalktekgGwr 475
qilkvia+ll++s ++ + +e+r+ +Lsd++ L++++renrr+llq svWqew+++l + ++++++e ++i+e+v+ +f++Ll+ha+k+e+gGwr
XP_006502410.1 817 QILKVIATLLRNSPQCPEsMEVRRAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDE-QKITEMVYAIFRILLYHAVKYEWGGWR 910
*******************************************************************.*************************** PP
DUF4704 476 vlvdtlailhs 486
v+vdtl+i hs
XP_006502410.1 911 VWVDTLSITHS 921
********996 PP
Or compare XP_006502410.1 to CDD or PaperBLAST