XP_017213453.1 has 2223 amino acids
Query: DUF4704 [M=486]
Accession: PF15787.9
Description: Neurobeachin/BDCP, DUF4704 alpha solenoid region
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-188 614.0 7.9 2.2e-188 613.0 7.9 1.5 1 XP_017213453.1
Domain annotation for each sequence (and alignments):
>> XP_017213453.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 613.0 7.9 2.2e-188 2.2e-188 2 486 .] 464 943 .. 463 943 .. 0.99
Alignments for each domain:
== domain 1 score: 613.0 bits; conditional E-value: 2.2e-188
DUF4704 2 advhspealilngvqlvvthsiqsilesvGGiqvLfPLfsqldqaeedeqlegeseadeklcatlleliaelleesetnqqqllrlkGflvlsfl 96
++vhsp+al+l++v+++vthsi+s+++s+GGiqvLfPLfsqld+ + ++ s +++++catll ++ ell++s ++q+q+l +kGflv+++l
XP_017213453.1 464 IFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFSQLDYRQPND-----SPVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYL 553
799*****************************************99886.....45889************************************ PP
DUF4704 97 LqsvspkhLtlevlsalksllkvlkslanselLlkdlvdsillnpklWiytdyeVQkeLysyLatdfvsdkkiltnlrrvstVlrlldilkqfYw 191
L+++s+ h+t+ vl++++s +k+l+ l+++ +Llk+l+d++l+n ++Wi+t+ +VQ +Ly+yL+ +f+ + +i++++rrv tVl+l+++lk++Yw
XP_017213453.1 554 LEKSSRVHITRAVLEQFLSFAKYLDGLTHGAPLLKQLCDHVLFNAAIWIHTPAKVQLSLYTYLSAEFIGTATIYSTIRRVGTVLQLMHTLKYYYW 648
***************************99****************************************************************** PP
DUF4704 192 venaksksgvtskslleeRpsqeeilklrallLslieqlvrksseisesevkalinyletvqddenvedvLelvirllseksasflealdskggi 286
+n+ ++sg+t+k+l+++Rpsq+ei++lra++L +++ql++k +++e+e+++++nyl t+++den++dvL+l+++l+se++as+++a+d+++gi
XP_017213453.1 649 ASNPLESSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMIPAFDQRNGI 743
*********************************************************************************************** PP
DUF4704 287 eiflkLLsreseaiRllaLkllgklllrspvkrksevmeaknlfsliserLllfseeltdktynvLfevllekaspkivlekhsepekssklelP 381
+++ kLL+++se iR++aLk+lg++l+++ +krk e+m++++lf+l++erL+++++++t +tyn+L+e+l+e++ +++v + h ep++++k+++P
XP_017213453.1 744 RVIYKLLASKSESIRVQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMMHTSTVTITTYNTLYEILTEQVCTQVVHKPHPEPDSTVKIQNP 838
*********************************************************************************************** PP
DUF4704 382 qilkviakllsqskdses.ielrkkiLsdllvLlksnrenrrallqmsvWqewLvalaklaeikeeeeseikelvielfkvLlvhalktekgGwr 475
+ilkv+a+ll++s++s++ +e+r+++Lsd++ L++++renrr+llq svWq+w+++l ++++++ ee ++i+e+v+++f++Ll+ha+k+e+gGwr
XP_017213453.1 839 MILKVVATLLKSSSPSAElMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKNPEE-QKITEMVYNIFRILLYHAIKYEWGGWR 932
*******************************************************************.*************************** PP
DUF4704 476 vlvdtlailhs 486
v+vdtl+i+hs
XP_017213453.1 933 VWVDTLSIAHS 943
********996 PP
Or compare XP_017213453.1 to CDD or PaperBLAST