PaperBLAST – Find papers about a protein or its homologs

 

Align V9GXA9 to PF15831 (SMIM5_18_22)

V9GXA9 has 86 amino acids

Query:       SMIM5_18_22  [M=56]
Accession:   PF15831.9
Description: Small integral membrane protein 5/18/22
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-31   93.9  14.0    3.6e-31   93.7  14.0    1.1  1  V9GXA9    


Domain annotation for each sequence (and alignments):
>> V9GXA9  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.7  14.0   3.6e-31   3.6e-31       1      56 []      10      65 ..      10      65 .. 0.99

  Alignments for each domain:
  == domain 1  score: 93.7 bits;  conditional E-value: 3.6e-31
  SMIM5_18_22  1 qelesvlqevllrLqslqpfqsewdiaaFvvlllFigtVllLlllvilycccscCc 56
                 qel+++++evl+rL+s+q+fqsewd+aaFvv+l+F+gtVllLlllv+++ccc+cCc
       V9GXA9 10 QELQATAEEVLGRLRSRQLFQSEWDVAAFVVFLTFVGTVLLLLLLVFVHCCCCCCC 65
                 89****************************************************** PP



Or compare V9GXA9 to CDD or PaperBLAST