PaperBLAST – Find papers about a protein or its homologs

 

Align O95751 to PF16297 (DUF4939)

O95751 has 146 amino acids

Query:       DUF4939  [M=112]
Accession:   PF16297.9
Description: Domain of unknown function (DUF4939)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.9e-59  182.9   0.0    9.5e-59  182.5   0.0    1.1  1  O95751    


Domain annotation for each sequence (and alignments):
>> O95751  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.5   0.0   9.5e-59   9.5e-59       4     111 ..      28     137 ..      24     138 .. 0.96

  Alignments for each domain:
  == domain 1  score: 182.5 bits;  conditional E-value: 9.5e-59
  DUF4939   4 kklrivlmerarl..rkrrwrnpipfpelfdGeserlpefivqtlsymlvdektfssdalkvaflitrlkGralewvmpyiqkdspllnnyraflnemkeef 103
              ++lr++++era l  ++r +++p+pfpe+f+Ges rlpefivqt symlv+e++f++da+kvafli++l+G+a+ewv+pyi+ dsp+l++yrafl+emk+ f
   O95751  28 EQLRLLVCERASLlrQVRPPSCPVPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEEWVVPYIEMDSPILGDYRAFLDEMKQCF 129
              89**********9989999*********************************************************************************** PP

  DUF4939 104 Gweddded 111
              Gw+dd++d
   O95751 130 GWDDDEDD 137
              ***88777 PP



Or compare O95751 to CDD or PaperBLAST