biolip::6ljaA has 841 amino acids
Query: DUF4962 [M=476]
Accession: PF16332.9
Description: Domain of unknown function (DUF4962)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-226 738.8 1.0 1.4e-226 738.5 1.0 1.1 1 biolip::6ljaA
Domain annotation for each sequence (and alignments):
>> biolip::6ljaA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 738.5 1.0 1.4e-226 1.4e-226 1 476 [] 8 481 .. 8 481 .. 1.00
Alignments for each domain:
== domain 1 score: 738.5 bits; conditional E-value: 1.4e-226
DUF4962 1 etlmhevretpyPlngatvktnavallWPdeanslgavldgveeekkkiekkkvkYkvrlaqdkefkkevikaeqeWavynlekklkkGkWyWqya 96
etlm+evr+tp+P++g+ vk n+++++WPd++++lg+vldgv ++ ++ek kv Y++r++qdk+f+k+v+++e++Wa++n+++ l++GkWyWq+a
biolip::6ljaA 8 ETLMYEVRATPSPADGTYVKVNPPRFMWPDKFPHLGPVLDGVPGQ--VDEKPKVVYRIRISQDKNFRKDVLTGERAWAFFNPFQCLAQGKWYWQHA 101
69******************************************9..999********************************************** PP
DUF4962 97 yvkkdekeewsevlqfevkdkaaklkpPslkevlaklkksHPrilllkkdwedfikrnkdnpeakayikkaekllkkpleklereidttgvkkldn 192
yv+ +++eews+v+qf +++++ +++pP+l++vla+++++HPr+ll+++dwe++i +n++npea++y++ka++++++pl++l++eidtt+v l+n
biolip::6ljaA 102 YVTPEGTEEWSPVYQFYIDKDTPEFNPPTLEKVLARYPSHHPRVLLDADDWENIIAKNNNNPEARTYMDKASQCISRPLKHLQEEIDTTNVVTLTN 197
************************************************************************************************ PP
DUF4962 193 evqkkslltresrkivdkeeaniealvraYlLtkDkkyakeaikrllellsmdkskavkgDFnaatllsllalaYDsfYdllteeekkllkkeike 288
+vq++s+l+resrkivd+eean+ealvraYlLtkD+ky+ e+i+rl e+ls++ksk+++gDFn +tlls++++aYD fY+ll++eek+ll+++i++
biolip::6ljaA 198 IVQRESALIRESRKIVDREEANVEALVRAYLLTKDEKYYREGINRLSEILSWQKSKYFAGDFNLSTLLSMSTSAYDGFYNLLSPEEKQLLLDNIRK 293
************************************************************************************************ PP
DUF4962 289 rgkkiykefvnrlenhiadnHvWqmtlRiltlaalavvgelpeAdkWldyvYevWvaRfPvLnkDGgWHngdsYfkvnlrtlievpalyselsGvd 384
g+k+y+e+vn+len+iadnHvWqmt+Rilt+aa+a+vge+peA+ W+dy+Y+ W++R+P+L kDGgWHngd+Yf+vn+rtlievp ++s++sG++
biolip::6ljaA 294 IGDKFYNEYVNHLENRIADNHVWQMTFRILTMAAFATVGEIPEASVWTDYCYNEWISRLPGLHKDGGWHNGDAYFHVNIRTLIEVPVFFSRISGFN 389
************************************************************************************************ PP
DUF4962 385 fFsdpWyknlalyvlysqppfsksagnGdshenllkpnkkrvlyadALarkvnnpyaaayvkeilkkepdilkksllaksddlalfRlltek 476
fF+dpWy+n+alyv+y+qppfsks+g+G+she +++pn+ r++yadALar++nnp+aaayv+ei++++pdil k+++ak++dl+++R++t k
biolip::6ljaA 390 FFADPWYNNNALYVIYQQPPFSKSGGHGNSHEGQRSPNGGRIGYADALARECNNPWAAAYVHEIMQEDPDILSKAFEAKPADLTWYRCTTPK 481
****************************************************************************************9865 PP
Or compare biolip::6ljaA to CDD or PaperBLAST