VIMSS352855 has 868 amino acids
Query: DUF4988 [M=182]
Accession: PF16378.9
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-36 111.8 4.1 1.6e-36 111.8 4.1 1.8 2 VIMSS352855
Domain annotation for each sequence (and alignments):
>> VIMSS352855
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 111.8 4.1 1.6e-36 1.6e-36 1 177 [. 25 200 .. 25 206 .. 0.86
2 ? -3.8 0.1 0.45 0.45 106 127 .. 787 810 .. 766 837 .. 0.63
Alignments for each domain:
== domain 1 score: 111.8 bits; conditional E-value: 1.6e-36
DUF4988 1 ledrvdslkervealesqvkelndnitalkalveegkviteveeaadgsyvltlsdgktitlkqgkdgekaaPvigvrdeeGlyyWtvttdGettelk 98
l++++d+lkerv+ le+ ++++n +i +++ve++ ++ + + ++ y+++ls+g+t+t+ +gk ++++P+ +v + +G +W t++ ttel
VIMSS352855 25 LRSDIDNLKERVANLEASIEQMNSDISNYQQMVEGKILVVGYSKDEQDNYTIELSNGETVTIYSGKVDMNDMPLFSV-NASG--HWAYTINDMTTELL 119
789******************************9999999999988888****************************.****..9*****88886665 PP
DUF4988 99 ..daegkkikavgkdgitPvlsvdeegyWtvsydeGksverilded.GkpvkAvdkdsaedsffksvvad..eeslvltLknge 177
d+ + i+ +g+ g+tP+l+vd +g+W +s+d+G++++++ +++ + +Av++ s s+f +v++d ++++++t+ +
VIMSS352855 120 vnDKPVSAIPEAGTAGVTPKLKVDANGFWLISIDNGSTWNKLGNNQiADGTQAVANAS---SLFSNVTIDeaTGQITFTIRADN 200
004444556666******************************7654256678888888...*********88888999886543 PP
== domain 2 score: -3.8 bits; conditional E-value: 0.45
DUF4988 106 kavgkdgitPvls..vdeegyWtv 127
+++g+d+ + + d++ +W++
VIMSS352855 787 NVTGTDSHASNFAwwSDSDTWWKI 810
566666666666522466778887 PP
Or compare VIMSS352855 to CDD or PaperBLAST