VIMSS734206 has 721 amino acids
Query: DUF4988 [M=182]
Accession: PF16378.9
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9e-21 60.4 14.0 3.3e-15 42.3 4.8 2.5 2 VIMSS734206
Domain annotation for each sequence (and alignments):
>> VIMSS734206
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.0 1.8 2.7e-09 2.7e-09 10 82 .. 39 119 .. 30 154 .. 0.72
2 ! 42.3 4.8 3.3e-15 3.3e-15 65 178 .. 182 307 .. 153 312 .. 0.78
Alignments for each domain:
== domain 1 score: 23.0 bits; conditional E-value: 2.7e-09
DUF4988 10 ervealesqvkelndnitalkalv...eegkviteveeaadg.syvltlsdgktitlkqgkdg....ekaaPvigvrdeeG 82
++++ l + +k+ln++i l+ +v g it++ee adg +y++ +s + it+++gk+g ++a g+ ++G
VIMSS734206 39 KELQELTDLCKKLNEDIYNLQVIVntdRIGDNITHIEELADGaGYTISFSKSAPITIRNGKKGdtgpDGDAGKDGIDGTDG 119
5678899999**************55445678**********88******************7444444555555555555 PP
== domain 2 score: 42.3 bits; conditional E-value: 3.3e-15
DUF4988 65 gkdg.ekaaPvigvr..deeGlyyWtvtt.dGettelkdaegkkikavgk..dgitPvlsv.........deegyWtvsydeGksverildedGkpvk 147
g++g ++ Pv+g+ + yyWt+++ Ge +l d++g++ika+++ dg tP l+v d++ yWt G+ e+ +++dGk++
VIMSS734206 182 GEQGdPGQNPVVGIMqdPADSEYYWTIKIgSGEPYYLADNDGNRIKATSTvhDGQTPQLGVkqwetsaggDDNYYWTQ--KIGTGPETWIEADGKKIV 277
333345789*****85346889*******89999*************97555*******9954444444445679*98..778889999********* PP
DUF4988 148 Avdkdsaedsffksvvad.eeslvltLkngee 178
A++k++ s f++v + + +++tL g +
VIMSS734206 278 ANAKNA--VSVFEKVDLKePDYVEFTLSGGAT 307
*****9..9*******9967999****99975 PP
Or compare VIMSS734206 to CDD or PaperBLAST