VIMSS104027 has 184 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.9e-16 44.4 0.3 3.3e-15 42.4 0.3 1.8 1 VIMSS104027
Domain annotation for each sequence (and alignments):
>> VIMSS104027
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 42.4 0.3 3.3e-15 3.3e-15 3 172 .. 7 158 .. 5 163 .. 0.77
Alignments for each domain:
== domain 1 score: 42.4 bits; conditional E-value: 3.3e-15
Rv2179c-like 3 lmiDiEtlgneetaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieenedaks 99
+++D+Et+ n ++ +i+s+G+v++ + ++ e+F++ v++++ + +++++ + i q++++ ++a++++ ++ + +fi +
VIMSS104027 7 VALDFETA-NGKRTSICSVGMVKVI--DSQITETFHTLVNPQDYFS-QQNIKVHGI-----QPEDV------ENAPTFDYVFPYMMQFI------AD 82
789*****.7779*********886..88999*********77743.323333333.....34433......34899************......59 PP
Rv2179c-like 100 lkvwgngasfDnviLraafelagleip.wkfw..ndrdvrTlvelakelgl.ekkrdipfegvkhnAlddAkhqaki 172
l v++++a+fD+ +L+++ + +gl+ p ++ + rT+ + + l++ + +++ f +h+Al+dAk++a+i
VIMSS104027 83 LPVVAHNAAFDMNVLHQSIQNIGLPTPnLTYFcsYQLAKRTVDSYRYGLKHmMEFYQLDF-HGHHDALNDAKACAMI 158
99**********************744344441155567899998866666344556666.579**********997 PP
Or compare VIMSS104027 to CDD or PaperBLAST