VIMSS2124639 has 257 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-09 24.2 0.0 2.9e-09 23.0 0.0 1.7 1 VIMSS2124639
Domain annotation for each sequence (and alignments):
>> VIMSS2124639
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.0 0.0 2.9e-09 2.9e-09 2 170 .. 9 173 .. 8 180 .. 0.69
Alignments for each domain:
== domain 1 score: 23.0 bits; conditional E-value: 2.9e-09
Rv2179c-like 2 hlmiDiEtlgne......etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefie 92
++++D+Et+g++ + +i++IGav + + +G +F+ +++ + vd+e+ik + + +e+l+d+ + + +++ e+ efi
VIMSS2124639 9 QVVLDTETTGMSfsgppqIGHNIIEIGAVEVI-NRRLTGRTFHVYIKPPRE------VDEEAIK-----VHGITNEFLQDK-PVFAEVADEFIEFI- 91
5789******987777556789*******996.4444688********666......4555654.....456678999877.899***********. PP
Rv2179c-like 93 enedakslkvwgngasfDnviLraafelagleipwkfwndrdvrTlvelake..lglekkrdipfe........gvkhnAlddAkhqa 170
k +++ ++a fD++ +++ f+ +g ++p k + ++v ++a++ g +++ d+ ++ v h Al dA+ a
VIMSS2124639 92 -----KGAELIIHNAPFDVAFMDQEFSYLGNPPP-KTAEMCSVTDSLAVARKmyPGKRNNLDALCDrlgidnskRVLHGALLDAEILA 173
.....6899*******************988777.33333333332233322112223333333334444444566677777776665 PP
Or compare VIMSS2124639 to CDD or PaperBLAST