VIMSS216056 has 236 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-09 23.3 0.0 4.3e-06 12.7 0.0 2.3 2 VIMSS216056
Domain annotation for each sequence (and alignments):
>> VIMSS216056
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 12.7 0.0 4.3e-06 4.3e-06 3 43 .. 42 83 .. 40 96 .. 0.77
2 ! 8.3 0.0 9.7e-05 9.7e-05 82 173 .. 110 201 .. 102 205 .. 0.70
Alignments for each domain:
== domain 1 score: 12.7 bits; conditional E-value: 4.3e-06
Rv2179c-like 3 lmiDiEtlgne.etaaivsIGavffdpetG..elGeeFyarvdl 43
+++D+Et g + ++ +++sIGav+ +e+G + ++F+++ +
VIMSS216056 42 VVLDLETSGLNpNRDQVLSIGAVA--IEDGaiDFAQQFERTLHR 83
679******9966779*******5..568844578888877654 PP
== domain 2 score: 8.3 bits; conditional E-value: 9.7e-05
Rv2179c-like 82 dalkeleefieenedakslkvwgngasfDnviLraafel.agleipwkfwndrdvrTlvela...kelgl.ekkrdipfe...gvkhnAlddAkhqa 170
+al +l +fi + v + a fD ++L++a++ +g+ ++ f + + + + + +e gl + + +++h+A +dA+ a
VIMSS216056 110 EALLDLLDFI------GNSPVLAFHAPFDQRMLARALKEsLGYRLQSPFLDIAELAPMLNPDtvlREAGLdDWVARF--GlqvEERHHASADAQVTA 198
79999*****......6789*************99987624455555566666666666555444555663333333..255789999999999988 PP
Rv2179c-like 171 kiv 173
+++
VIMSS216056 199 ELA 201
765 PP
Or compare VIMSS216056 to CDD or PaperBLAST